Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00184 ATGACTCAAGCCAATGGCCACCGTCGTGTTGATCAAACAGTGATTGACATAAAGAAACCGCCGGTGAGCTTCACCGGGGGTCTGGTGTTCGAGTGCCTCACTTACACCGTTACAAAGAAGAAGAAGGTTGAGGAGAAGTGGTCGAATCAAGAGGTGGACCTGCTGCATGAAATCACTAGCTATGCACCAAAGGGTTGCATCACTGCAGTGATGGGCCCTAGTGGCGCAGGAAAGTCCACTCTCTTGGATGGCCTTGCTGGGAGGATTGCGAGTGGGAGCCTCAAAGGGAGGGTCTCCTTGGATGGGGCAACTGTGAGTGCAAGCTTGATCAAGAGAACTTCTGCATATATCATGCAGGAAGATAGGCTTTTCCCAATGCTAACTGTCTATGAGACTTTGATGTTTGCTGCTGATTTTCGTCTTGGACCACTTTCACTTGCTGATAAGAAGCAGAGGGTGGAGAAGCTCATTGACCAGCTTGGCTTAACGTCATCTCGAAACACCTACATAGGAGACGAAGGTACAAGAGGAATATCCGGCGGAGAGCGGCGGCGGGTCTCAATCGGCGTGGACATCATCCACGGCCCATCCCTCCTCTTCCTGGACGAGCCAACCTCAGGGCTAGACTCCACCAGCGCCCACAGCGTGATCGAGAAAGTGCACGACATCGCTCGCGGCGGCAGCACCGTGATCCTCACCATCCACCAGCCCTCATCAAGAATCCAACTCCTCCTCGACCACCTAATCATCCTCGCAAGAGGGCAACTCATGTTCCAAGGCTCACCCCAGGACGTGGCACTCCACCTGAGTCGCATGCCACGCAAAATCCCCAAAGGAGAGAGCCCCATCGAGCTTCTCATTGACGTGATCCAAGAGTATGATCAGTCTGAGGTTGGAGTTGAGGCACTTGCTGAGTTCGCACGCACTGGTGTCAAGCCACCTCCTTTGTCTGGCCAACAACAACACTCTGTGTCTTCTGTTGCTCCGTCCTCGCACCTTAGCCATAGGTATGAGGAAAATTCTCAGGACTTGTCTTACTCGTCGCAAGTGAGTAGAAGGGTCGTTGATGGTTTTGATCACAGTCTCAGAAGTTCCCATAACAACAACACATCAATGTCGTGGAGCACTGGGAATAGTGCGGCGTTTTTGAAATTCACTCCTTCGCGGCTTAAGAATGATCACAAGCTGCAGAATACCGCGAGAACCAATGCTTCACCTGGATACTACGCACACTGGAGTGAAATCCTCGAAGCCACTCCAACACCCCGTAGCAGTGACTACACAGTGAATGAGAAGGACTACCTCGCTCCCTCAAACGCCACACAGGAACACCTTGGAGCAAAGTTTGCAAATTCCTACCTAGGAGAGATTTGGATCCTTATGCGTCGCAACTTCATAAACATAAGGCGCACCCCTGAGCTCTTCCTTTCAAGACTCATGGTTCTCACCTTCATGGGCATCATGATGGCCACCATGTTCTTCAAGCCAAAAGAAACTTTGCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACAGTGTGCCTTTTCTTCTTCTCCTCTAACGACGCCGTCCCGGCCTTCATCCAAGAAAGGTTCATCTTCATAAGGGAAACCTCTCACAACGCCTATAGAGCTTCCACTTACACCATTGCAGGCCTAATCACTCACATGCCCTTTATTCTTCTCCAAGCAACTGCTTATGCCGTCATTGTTTGGTTTGCCCTAAAACTTAGAGGCCCTTTTCTTTACTTCTTGCTTGTTCTCTTCGTTTCTCTTCTTTCAACCAATTCATTTGTTGTGTTTGTGAGCTCAGTGGTTCCAAACTACATCTTGGGTTATGCTGTAGTTATTGCCTTCACTGCCTTGTTCTTCTTGTTCTGTGGATACTTCTTGAACAGCAACGACATTCCCCATTATTGGCGTTGGATGAACAAAATTTCGACCATGACGTACCCTTATGAGGGGCTATTGATGAACCAGTACCAGACCAATGATACCTTTGGGTTTGGGTAA 2016 0.496 MTQANGHRRVDQTVIDIKKPPVSFTGGLVFECLTYTVTKKKKVEEKWSNQEVDLLHEITSYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGRVSLDGATVSASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSLADKKQRVEKLIDQLGLTSSRNTYIGDEGTRGISGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPQDVALHLSRMPRKIPKGESPIELLIDVIQEYDQSEVGVEALAEFARTGVKPPPLSGQQQHSVSSVAPSSHLSHRYEENSQDLSYSSQVSRRVVDGFDHSLRSSHNNNTSMSWSTGNSAAFLKFTPSRLKNDHKLQNTARTNASPGYYAHWSEILEATPTPRSSDYTVNEKDYLAPSNATQEHLGAKFANSYLGEIWILMRRNFINIRRTPELFLSRLMVLTFMGIMMATMFFKPKETLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASTYTIAGLITHMPFILLQATAYAVIVWFALKLRGPFLYFLLVLFVSLLSTNSFVVFVSSVVPNYILGYAVVIAFTALFFLFCGYFLNSNDIPHYWRWMNKISTMTYPYEGLLMNQYQTNDTFGFG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00184 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 9 669 - -
Gma01g00184 671 Pfam ABC-2 type transporter 456 662 IPR013525 GO:0016020|GO:0140359
Gma01g00184 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 9 669 - -
Gma01g00184 671 MobiDBLite consensus disorder prediction 314 348 - -
Gma01g00184 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 278 IPR003439 GO:0005524
Gma01g00184 671 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524
Gma01g00184 671 MobiDBLite consensus disorder prediction 311 348 - -
Gma01g00184 671 Gene3D - 40 272 IPR027417 -
Gma01g00184 671 SMART AAA_5 64 262 IPR003593 -
Gma01g00184 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 266 IPR027417 -
Gma01g00184 671 Pfam ABC transporter 56 206 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00184 Gma-Chr1 2028733 2032278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00184 48 261 Calmodulin-binding Proteins AT2G36910 29.680 8.38e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00184 K05681 - gmx:100778955 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00184 01 2028733 2032278 Gma09g01878 09 44374149 44377629 GST