Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00154 ATGCAAACGACCAAGTACGATGTCTTCGCCAGACTCAAAGCAAACTACTCCGAAACCGTACTTCCGCCACCACCGCCACCGCCACAAATCACCCCGTCGACGCTAATATCCTTCACCGTGGTGGTGGCGGTGGTCTGCTTCGTGGGTTTCAGTATTCTCTGCTTCTTCAGGTGCTGTTTCGTGAACATAAGCTCCACCACCCTCGTTCATCTTTCTCCCAATGCTTCTCCCTTCAGAGGCCTCGACCCTTCACAGCTGCAAGCGTTCCCCACGTTCCTCTACGCCACCGTGAAGGATCTCCGCAAGGAGAAGAATCAGTATTCATTAGAATGCGCCATTTGCTTGTTGGAGTTCGACCATGACAGCATGCTGAGACTCTTAACCGTTTGCTACCATGTTTTCCACCAAGAGTGCATCGATTTGTGGCTAAGGTCACATAAGACTTGCCCCGTTTGTCGCACGGATCTTGATCAGTCACCATTGATCACAAACAAATCTCCAGAACACCAAAACGAGGACAATATTGTAGAACAAGAGATCAGCACAGATCATCATCACGTGTGCATTGATGTAAAAGAAGGTGATGATAGTGAGGGCATGCAGGAACAGAAGATTGAATTTGCACGTTCACACTCAACGGGACATTCCATAGTTATGGTTAGAGGAGAAGGGAGACATGCTGATAAATATACGTTGAGATTGCCGGAGAATGTGGCGTTCAAAATTGTAAAAGGAGGGCACAACTACTCCAAGAGTTGTTCTAGTTCCAAAGATATGGCAAGGCTTGCTGCACCTTGCAGGAATTGTGGTTATGTTCAAACTGTATTTCAAAGTTCCTCATCCCGTAGTGATATAAAAAATATTTAA 867 0.4648 MQTTKYDVFARLKANYSETVLPPPPPPPQITPSTLISFTVVVAVVCFVGFSILCFFRCCFVNISSTTLVHLSPNASPFRGLDPSQLQAFPTFLYATVKDLRKEKNQYSLECAICLLEFDHDSMLRLLTVCYHVFHQECIDLWLRSHKTCPVCRTDLDQSPLITNKSPEHQNEDNIVEQEISTDHHHVCIDVKEGDDSEGMQEQKIEFARSHSTGHSIVMVRGEGRHADKYTLRLPENVAFKIVKGGHNYSKSCSSSKDMARLAAPCRNCGYVQTVFQSSSSRSDIKNI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00154 288 PANTHER RING-H2 FINGER PROTEIN ATL29 20 260 - -
Gma01g00154 288 SUPERFAMILY RING/U-box 110 159 - -
Gma01g00154 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 159 IPR013083 -
Gma01g00154 288 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Gma01g00154 288 SMART ring_2 111 152 IPR001841 -
Gma01g00154 288 CDD RING-H2_EL5_like 110 153 - -
Gma01g00154 288 Pfam Ring finger domain 110 153 IPR001841 -
Gma01g00154 288 PANTHER RING FINGER DOMAIN-CONTAINING 20 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00154 Gma-Chr1 1672438 1673304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00154 29 244 Rapid Response to Elicitors AT3G05200 36.207 7.00e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00154 - - gmx:102667137 576.63