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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma01g00139
ATGAGCTTTCAGGACATCGAGGCCGGCCGTTCCTTCGCTTCCCGGCGAAATCTAATCAACGGCAAACAAGACCCCACGCAGGCGGTGGCTTCCGGCATCTTTCAGATCAACACCGCCGTCTCCACGTTCCAGAGACTCGTCAACACCCTCGGAACCCCCAAGGACACCCCCGAACTCCGCGATAAGCTGCACAAGACGAGACTGCACATTGGACAATTGGTGAAGGATACTTCGGCTAAGCTTAAGCAAGCTAGTGAGATTGATCACAACGTTGAAGTTAATGCAAGTAAGAAGATAGCAGATGCGAAGCTTGCAAAAGATTTTCAGGCGGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTTCAGCGGAGAGGGAAACTGCTTACACTCCTTTTGTTCCGCAAGCACTTCTTCCATCCAGCTATACAGCCAGTGAAGTAGACATTGGTTCTGATAAGACTCCAGAACAGCGTGCACTTCTTGTGGAATCCAGAAGACAGGAGGTATTATTCTTAGATAATGAGATTTCCTTCAATGAGGCTATCATTGAGGAAAGAGAGCAAGGCATTCAAGAAATCCAGTCGCAGATTGGTGAAGTAAATGAGATTTTCAAAGATCTTGCTGTGCTTGTCCATGAGCAAGGAGCAATGATTGATGATATCGGGTCCAATATTGAGCATTCCCATGAAGCAACTGCGCAAGCAAAATCTCAACTTGCCAAAGCTTCAAAGACGCAAAGATCAAATTCATCTTTGACATGCTTGCTTCTGGTGATATTCGGGATCGTGCTTCTAATCGTCATCATTGTTCTTGCTGCTTAG
822
0.4647
MSFQDIEAGRSFASRRNLINGKQDPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELRDKLHKTRLHIGQLVKDTSAKLKQASEIDHNVEVNASKKIADAKLAKDFQAVLKEFQKAQRLSAERETAYTPFVPQALLPSSYTASEVDIGSDKTPEQRALLVESRRQEVLFLDNEISFNEAIIEEREQGIQEIQSQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEHSHEATAQAKSQLAKASKTQRSNSSLTCLLLVIFGIVLLIVIIVLAA
273
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma01g00139
273
SUPERFAMILY
t-snare proteins
22
235
IPR010989
GO:0016020|GO:0016192
Gma01g00139
273
SMART
tSNARE_6
175
242
IPR000727
-
Gma01g00139
273
ProSiteProfiles
t-SNARE coiled-coil homology domain profile.
180
242
IPR000727
-
Gma01g00139
273
CDD
SNARE_Qa
183
241
-
-
Gma01g00139
273
PANTHER
SYNTAXIN OF PLANTS PROTEIN
2
272
-
-
Gma01g00139
273
PANTHER
SYNTAXIN
2
272
IPR045242
-
Gma01g00139
273
SMART
SynN_4
13
127
IPR006011
GO:0016020
Gma01g00139
273
Pfam
Syntaxin-like protein
30
129
IPR006011
GO:0016020
Gma01g00139
273
Gene3D
-
20
133
-
-
Gma01g00139
273
ProSitePatterns
Syntaxin / epimorphin family signature.
186
225
IPR006012
GO:0005484|GO:0006886|GO:0016020
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma01g00139
Gma-Chr1
1546798
1552068
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma01g00139
1
261
SNARE and Associated Proteins
AT5G46860
77.395
1.64e-146
409
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma01g00139
-
K08488
gmx:100810149
456.447
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma01g00139
01
1546798
1552068
Gma01g00139
01
1546798
1552068
ECH
Gma01g00139
01
1546798
1552068
Gma09g01920
09
44817849
44822437
GST
Gma01g00139
01
1546798
1552068
Gma16g00834
16
14807314
14810601
PCT
Gma16g00834
16
14807314
14810601
Gma01g00139
01
1546798
1552068
PCT
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