Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00130 ATGGAGCTATTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACGCCAATCCCACATCAAGTTGGAGGAGAAGCACAGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCCTTGGACTCAAGAAACTCCATTCAATCAACAATGGCCAAACAAGACTCTTGCTTCGACCTCTCCCTCTCCAATCCAAAAGCCTCAGATAACAACAACTCCAACCTCATTCATCACCACCACTTCCAAACAAGTAATGCCACCACCATCATCAACCCTTTCCAACTACCCTTTCAGCAAAACCACTTCTTCCACCAGCAGCAGCAGCCACTGTTCCAACCTCAGCACCAAAGCCTAAGCCAAGACCTTGGCTTTCTAAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACCCAGCACCATCATCTCCCTCTTGAAGCTTCCACCACCACCCCTTCGATTATTTCCAACACCAACACTGGCTCCACCCCTTTCCACTCTCAGGCCCTTATGAGATCAAGATTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGGGCTCCGAGGATGCGTTGGACTTCTACCCTCCATGCTCGCTTTGTTCATGCTGTTGAACTCTTGGGTGGCCACGAAAgggctacacccaaatcagttcttgaactaatggatgtcaaggatctcactttagctcaTGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGGGCGGCGGCTTCATCAGGGCAATCAGATGTGTATGATAATGGTTCATCTGGTGATACTTCTGATGACTTAATGTTTGACATAAAATCTTCAAGAAGGTCTGATCTATCAGTTAAGCAAGGAAGATCAAGTGTTAATCAAGATAAGAAATATCATGGTCTTTGGGGTAACTCTTCAAGGGAAGCTTGGTTGCATGGGAAGACAAAGGCTGATTCTGTTGGAAACGTGCCTTCTTATCTTGAGAAGGAAATGGATCCAAAGTGCCTAAGCTATGAGAGAATATCAGATGGAAGTTCATCCTCAAATCTTTCAGGATCAAGCCCAAAGAAGCCTAATTTGGATTTGGAATTCAGCTTGGGCCAGCCACTTTAA 1128 0.4362 MELFPAQPDLSLQISPPNANPTSSWRRSTEEDMDLGFWKRALDSRNSIQSTMAKQDSCFDLSLSNPKASDNNNSNLIHHHHFQTSNATTIINPFQLPFQQNHFFHQQQQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHLPLEASTTTPSIISNTNTGSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSRRSDLSVKQGRSSVNQDKKYHGLWGNSSREAWLHGKTKADSVGNVPSYLEKEMDPKCLSYERISDGSSSSNLSGSSPKKPNLDLEFSLGQPL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00130 375 MobiDBLite consensus disorder prediction 252 276 - -
Gma01g00130 375 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 374 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gma01g00130 375 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Gma01g00130 375 MobiDBLite consensus disorder prediction 1 30 - -
Gma01g00130 375 MobiDBLite consensus disorder prediction 252 277 - -
Gma01g00130 375 MobiDBLite consensus disorder prediction 11 26 - -
Gma01g00130 375 MobiDBLite consensus disorder prediction 342 375 - -
Gma01g00130 375 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 374 - -
Gma01g00130 375 Gene3D - 193 250 - -
Gma01g00130 375 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
Gma01g00130 375 MobiDBLite consensus disorder prediction 345 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00130 Gma-Chr1 1486171 1491375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00130 1 374 G2-like Transcription Factor Family AT4G17695 38.265 4.27e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma01g00130 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00130 - - gmx:100798081 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00130 01 1486171 1491375 Gma01g00130 01 1486171 1491375 ECH
Gma01g00130 01 1486171 1491375 Gma09g01928 09 44870529 44875889 GST