Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00118 ATGGCAGAAGCAGAATCCGAAGCGCTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGCCTCCAACAACGCCAAATCCGCTCTCAAGTACGCCAACCGCGCCCACCGCCTCTGCCCGCACCTCGCCGGCGTGCCGGAGACCGTCGCTGCCCTCTCCGTCCTCGCCGCGCCGGACTGGTACCGCGCCCTCGGCGCCGAGCCCTTCGCGAGCAGCAGCGTCATCCGGAGGCAGTACAAGAAGCTCGCGCTGCTCCTCCACCCCGACAAGAACCCCCACGTGGCCTCCGAGGAGGCCTTCAAGCTCCTCGGCGAGGCCTTCCGCTTTCTCTCCGACAGAAACCGCCGCCGCGAGTACGACGCCGAGCTTCGACGTAAAATCGAGGCGGCGGAGAGTGAGAGCGAGACATTCTGGACTGCCTGCTCCACTTGCAGGCTCCTGCACCAGTTTGAGAGGAGGTACTTGGGGCAGGAATTGGTGTGTCCGAGTTGTGAGAAGGGTTTTAGGGCTGTGGAAGCGGTTCAGAGTGATGATGATGGGGATGTTAGGGTTAGGAGTAGGAGGTTAAAGTTGAAAGAGATGGAGAAGAGGGAAATTGGGGTGGAAGGGAAAGTGGGGAATGCGAAGGAAGGGAGATTGGGGAAGAGAATGTGTTCGGTTGGGGAGGTTTTGGAGAGGGCTAAACCTAGTAATAGTAAGAGGGTTAAAAAAAATGGGGAGGAAATGATGACATTGGCTGAATTCCAGAGTCAAGTGAAGAGAAAATTGCAGGGGGAAAAGTTGAAGGCAAAAGGAAATGAAAAGGAAAAGGAGAAGGAGGATGGAATTGAGAAGAGGAGAAACCGGGCGGAGAGGCGGCAGGGATTGAGAAATAATGGAGGTTTAGAGGTTGGGGAGGTGAGGGGTTTGAAGAAGAGTGTGAAGCCTGCGATTGAGGAGAAGAGGAAGGGGTTGAGAATTGAGAAGCATAGGGGGGGTTCTAGTGGAGGGGATTTGGAGGATATGGCAGTGCTGGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAAAAGCTTTAAGAAAGGCCAAGTATGGGCGGTGTATGAAGATGAGGATGGAATGCCGAGGAATTATGCCTTGATTGATGAAACTGTCTCGGTGAATCCCTTTGGAGTGAGGATAAGTTGGTTGGATGTACAGAACAGTGGGGATGGGAGGATAGTTAGTAGGGAGAAAATTGGGTTTCATATACCTTGTGGGAGATTTAAGGCTACCAGGAAGGCTTCTGTAAATTCGGTGAATATCTTTTCTCATGTTGTGGATTGTGACAGGGCAGCGCGCGAGCTTTACAAAATTTACCCCAAGAAGGGATCGGTATGGGCGCTTTATGGGGAGGGAAGTATTGATGTGGATGAGGGCAAGGGATGCTATGACATTGTCGTGTTTTTGACGAGTTACAATGAGGTGAATGGTCTGAGTATGGCGCATCTTGAGAAGGTTGATGGTTACAAGACAGTATTCAAGAGACAGGAGAAGGGGAGTGGTGCTATTAGATTTCTTGGGAAGGATGACATGTGGTTAGTTTCACATCAGATTCCTGCACGGAAGCTTCTTTGTGATGAAACTCCTGAACTGTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATTGGTGGATAG 1686 0.5107 MAEAESEALRLKAMAESKFKASNNAKSALKYANRAHRLCPHLAGVPETVAALSVLAAPDWYRALGAEPFASSSVIRRQYKKLALLLHPDKNPHVASEEAFKLLGEAFRFLSDRNRRREYDAELRRKIEAAESESETFWTACSTCRLLHQFERRYLGQELVCPSCEKGFRAVEAVQSDDDGDVRVRSRRLKLKEMEKREIGVEGKVGNAKEGRLGKRMCSVGEVLERAKPSNSKRVKKNGEEMMTLAEFQSQVKRKLQGEKLKAKGNEKEKEKEDGIEKRRNRAERRQGLRNNGGLEVGEVRGLKKSVKPAIEEKRKGLRIEKHRGGSSGGDLEDMAVLDSDFYDFDKDRVEKSFKKGQVWAVYEDEDGMPRNYALIDETVSVNPFGVRISWLDVQNSGDGRIVSREKIGFHIPCGRFKATRKASVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALYGEGSIDVDEGKGCYDIVVFLTSYNEVNGLSMAHLEKVDGYKTVFKRQEKGSGAIRFLGKDDMWLVSHQIPARKLLCDETPELLKDCWELDPASLPSDLLTIGG 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00118 561 Pfam Domain of unknown function (DUF3444) 334 533 IPR024593 -
Gma01g00118 561 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 560 - -
Gma01g00118 561 PANTHER BNAC03G44070D PROTEIN 6 560 - -
Gma01g00118 561 CDD DnaJ 59 112 IPR001623 -
Gma01g00118 561 Gene3D DnaJ domain 52 144 IPR036869 -
Gma01g00118 561 MobiDBLite consensus disorder prediction 257 289 - -
Gma01g00118 561 PRINTS DnaJ domain signature 61 79 IPR001623 -
Gma01g00118 561 PRINTS DnaJ domain signature 79 94 IPR001623 -
Gma01g00118 561 PRINTS DnaJ domain signature 95 115 IPR001623 -
Gma01g00118 561 ProSiteProfiles dnaJ domain profile. 59 123 IPR001623 -
Gma01g00118 561 Pfam DnaJ domain 59 120 IPR001623 -
Gma01g00118 561 Coils Coil 253 286 - -
Gma01g00118 561 SMART dnaj_3 58 115 IPR001623 -
Gma01g00118 561 SUPERFAMILY Chaperone J-domain 53 123 IPR036869 -
Gma01g00118 561 MobiDBLite consensus disorder prediction 257 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00118 Gma-Chr1 1338507 1340350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00118 6 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.964 3.60e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00118 - - gmx:100813361 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00118 01 1338507 1340350 Gma09g01938 09 45007074 45008993 GST
Gma16g01114 16 27992961 27996915 Gma01g00118 01 1338507 1340350 PCT
Gma02g00383 02 3996898 4000407 Gma01g00118 01 1338507 1340350 PCT