Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00088 ATGGAGGGTGGTGGAAGAGAAGGTTATAATGGAGTCATCATGACGATGACACGAGACCCGAAGCCGAGGCTACGGTGGACGGCAGATCTCCATGACCGGTTTGTGGATGCAGTCACAAAGCTTGGTGGCCCCGATAAGGCGACTCCCAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGGCTGACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCAAAAACAAAATGAGGAAGTGCACAAAGAGAATAGTAGATGTTCGTATGTAAATTTTAGTAATCGTTCTTTGGCACCAAACACCAGTTACAGAGGTGATGATGAAGGGGGAGAAATCCCAATAGCAGAAGCATTGAGGTGTCAGATTGAAGTTCAAAAGCGATTGGAAGAGCAGCTAAAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCACAAGGGAAGTATTTGCAATCGGTGTTAGAGAAAGCCCAGAGGAGCCTTTCCCTGGATGGACCAGGCAGTCTTGAAGCATCAAGAGCTGAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAACAAAACATAATAGAAGTGAATAATTTTTATAGTAAGAGCCATGGCTCAGCTTTCTATAATCAGGAAGTAGGAAGAGAACAAAATAGGGACCAAAAGCCAAAGGTTGAAGGGGGTTCTATACAGTTTGACTTAAACATCAAAGGTAGCAATGACCTTGTATCTGCAGGTGGGGCTGAAATGGATGCCAATATGGTTTCATCATATAGGGTATAA 813 0.4268 MEGGGREGYNGVIMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQAQKQNEEVHKENSRCSYVNFSNRSLAPNTSYRGDDEGGEIPIAEALRCQIEVQKRLEEQLKVQKKLQMRIEAQGKYLQSVLEKAQRSLSLDGPGSLEASRAELTEFNSALSNFMENMNKDSKQNIIEVNNFYSKSHGSAFYNQEVGREQNRDQKPKVEGGSIQFDLNIKGSNDLVSAGGAEMDANMVSSYRV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00088 270 Pfam MYB-CC type transfactor, LHEQLE motif 119 164 IPR025756 -
Gma01g00088 270 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Gma01g00088 270 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Gma01g00088 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 255 - -
Gma01g00088 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Gma01g00088 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 255 IPR044848 GO:0003700
Gma01g00088 270 Coils Coil 121 151 - -
Gma01g00088 270 Gene3D - 20 78 - -
Gma01g00088 270 SUPERFAMILY Homeodomain-like 21 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00088 Gma-Chr1 966778 969285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00088 12 190 G2-like Transcription Factor Family AT3G24120 52.174 1.18e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma01g00088 Myb_DNA-binding 2e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00088 01 966778 969285 Gma01g00088 01 966778 969285 ECH
Gma01g00088 01 966778 969285 Gma09g01964 09 45287392 45290655 GST