Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00036 ATGTCACGCGCCGCTGCTTCATTCGGAATTCTCCTCTGTCTGTTCCTTGCCGCCGCCGCCGTCGTCAACTGCTCCGATCAGGCAAACTGCAGCACCACATGCATTGCGGAGCAATGCGACACTGTTGGAATCAAATATGGCAAGTATTGCGGGGTGGGGTACTGGGGTTGTGCTGGCGAGAAACCATGCGATGATCTTGATGCTTGCTGCATGGCCCATGACGACTGCGTTGACAAATTCGGAATGACTCATGTGAAATGTCATAAGAAATTAAAGAATTGCCTAACCAGGGAACTGAAATCTGGTAAGGTTGGATTTTCCAAGGAGTGTCCCTACAGCAGAGCTGCACCTACGATGATAAGAGGCATGGACTTGGCCATCTTGCTAAGCCAATTGGGTGACTCCAAGCTAGAGAAAAGGTTTCTTCGTCTCGTATTCGTTTGTCAGCACGAAACCAAGCCTCATCATAGCTATTCTTTCTTTGATAAACAAATAAAACGAATCGTTAGTTCTTCAGTTCGTGTGTTTGCGCAAAGCATGTTGCATAGAAGCTTCAAGCCCGCAAAGTGCAAAACGACATTGAAGCTCGCCGTTTCACGCATAAAGCTTTTGAAGAACAAGAGAGAAGCCCAAATAAAGCAACTCAAGAGAGAGTTGGCTCAATTGCTTGAGTCTGGTCAGGACCGAACTGCTAGAATCCGGGTTGAACATGTTGTCAGAGAAGAGAAAACGATGGCAGCTTATGATCTTGTTGAGATATACTGTGAACTTATCGCCGCACGCTTGCCCATGATCGAATCACAAAAAAACTGCCCCATTGACTTGAAGGAAGCAGTTTCAAGTGTAATATTTGCATCTCCGAGATGTTCAGACCTACCAGAGCTCATGGATGTGAAGAAGCAAATCACATCTAAGTATGGAAAAGAATTTGTCTCAGCAGCTATTGAATTACGCCCTGACTGTGGTTTGGTTGAGAAATTGTCTGCCAAAGCGCCTGATGGTCCAACCAAGATAAAAATACTGGCCGCAATTGCCGAGGAGCATAATATCAAATGGGAACCCAAGTCACTTGGAGAAAATGATGTAAAGTCTTCTCAAGACTTTTTGGTTGGGCCAAGTACTTCTGAAAAGGTTGCTTATGCTGAACCTTCTCAAATTCATGTTCCACCTGCTCATGATGAAAAGGGTCCTTCCAATTTACATGCTCCCTCACAAGTTAAACCAGTGCATCATTCATCTACAAATTCATATGAGCAGACTGCAAGTGGTGCTGCTAGAAAGGATCAATCAACAACATCAGGCGTGTCCAATTCAGAAGTCGGATCTTCAGGAACTGGAAGTCAAGAAACGAAATTTCAAGATTCATACTCTGGAAACAATAGTTCTTTTCCTATGAATAGGCAGAATTGGAGCATGGAATTCAAGGATGCGGCCTCTGCTGCGGAGGCAGCTGCAGAATCTGCCGAACGTGCTAGCATGGCTGCAAGGGCAGCTGCAGAACTTTCAAACCGTGAAAATATGACAAGGCAGTATTCAAGTGGATCACATAGTTCTTCTAGAAGCGGGTTGAGAGATGAAAGATCCCAAGAATACACTTTTCATGATGACAAAAATCTTTCTACAAGTCCTGTTGATGCTAGCTTCCATAGAAGCAGTTCTGGGATGCACAATGAACAAATTACTGCTACAGAACAAGATAATCTGGTAGGACCGCCCAATGAATATTACAGGAATAGTCATGAGAATGTGGTGAGACATGCCCAGTCAGCTTCATTGATGCCTGGCAGTGTTTTCAATGATGATAAACCATTTACCGATGGTTCTCAAATGGCTGATATATATCAGCATAATAACTCATTTGGGCAAAAGAGTAGTGACTTACCCGAAATGAGTATAAAAACACAAGCAGGCAGAAGTGAAGAAGATTTTGTGACTGACCTATATGATGACAGTGATTTGAATGCTGAAAACAATTATCACTTTGGAGATGCAAGGACAAATAGACAATCTAGTAAAGTTTCCTCTTCTCATTTCATTACTCCAACTGATGATCACAATGATAATTTGGACTTGGATGACTGGAATACGAGGAACAAAGCTGTGGAAGACCCTTTTGTTACTGATGAAGTAAACACTCAGAGAAACAATATGGAAACAAGTTCTTATAATGATACTACTGTTGTATTTGATGATTCTGGATCAGAGGATGATGATCATAAGTTTGATGTTGATAAAAAGTACAATGGTGAGGGATCTAGTTTGTTTGTCTCATCCCCTGCTAGCAAATCACAAGTTGATCCATTTGAAAATACAAATTCTTTGGCCTATGGACAAAACATTGATGAGAAAGTGACAAGTTCTGGTACACAGTCACATTTTTCTGTGGTTTCTGAAAGATTGACATCTGCAGTTTCTTCTGAAAAAGAAGACTTGCCATCTGTCACTTTTGATGATTCAGATGACCCAGGTTCAGATAGTGACATGAATTTTGTCAACAAGTCTAAGGTTTCTGGGCTCTCTGATTATGGAAAGTTTTTCCTTGATCCGATTGCAAGCCATGGGGTTCCAGGGTCCTCATCAAGAAATGAGAAAAATGTGGGCACTGACAGAAAGTCTTGGTTGTCACCTTTGTCAGTTGATTCAGATACTGTGGAAGAGCATTTTGAGAGAAGGGTAGACACCACTACTGTGTCAGAAAAGAATTTGGGTTATGATGACTTGCCAGCCAGTCAGCCACCTACAAAGGAAAGAAGCTCTATATTGGGTTTGGATCTCGAGGCAAACAATGATACTGAAACTCTGGAGGAATATCATAAAGAGAGTGGCAAGGAATTAAGCTATGGTACCTTGAAGGGCGGTCTTCGCAATAAAGGCTTCAAGCGACCACCTTATATTAAGAATACACTGGATGATGTTTCATCTTCATTGGGGGACACTTCAGTCCAGAATGAAGGATCTTTGCCTACAGCAAGGACTTCAATTGGTTCTGATGCTCGTGTTCAGGACAAGTACACGAGGGAAGTGAGCAGAGGAAACAGGAATGTGGGCCTGGGAGCGCACAAAATACCTTCTGATTCTGATAGTTACCGTGTGGTTGCAAATTCACAAGAGACTCTTGCTAGTACTAATGAACCTCGCATTCAAAAAGAGCAGAGGGAAGTAAAAAAGAAATCAAGCTCAAGGGCCTCTGTTACATACTTCGGTTCTGATAATAGTGATTCTGAAGATGAACTTACTAAACAAAATTCACCTAGTCTTGCCCGTCCTATTAGTGGAATATCTCGAAGGACATCAGCTTCTTCTAAAGCTGCTACAGGTTTAAGCTCAAGAGATGCTCCTTTATCCAAGGCTTCTGTGACTTCTGCTGCAACACTTGGATGGAAATCTTCAAGGACTTCTTATGAGAGTAATAATCAAAATGCTTCAACCATAATGAAGAGCTCTGAAAATGGGACAGGATCTAAGCCTGGATCAGCCAAAAACAAAGCATCCGAGCCAATTTCAGAACCTAATAGATCCTTGGATGGGGAAATTTCGAAATCATCTGCAAGGGTGCAACCTTTCAGTTCTCCTAAAACAGTGATACAAGATAATGAAGAGGCCCAAGAGGTTGATGGAGATACTTCCTCTAAGCAGAAGGTTGGGCACGTTCATCCAAAGTTACCCGACTATGATTCTTTTGCTGCCCACTTCCTATTCAGAGAAATGGAAAACATCAAAGATCCATCAATTTACCGCAATCCAGTCATATTGCAGAGCGAGGACTTAACCAAGTATATTCTGGAAACTGCTGTTTACCCTAGAGAACCTGCGCCTCTAAAAGAGCTGAGGGAAGCCACTAATAATCACCCTTGGGGCTTCATTGCTACTTTACCTGAAGCGGGTCAGCTAATGACCTTACTTTTGAAGCTGTTGAATCCCAAAAAGACCATTGAAGTGGGAGTGTTTACTGGTTATTCCCTTCTCCTCACCGCACTCAACATTCCTCATGATGGAAAGATTACAGCCATAGATATTAACAGGAAAACTTATGAGGTTGGTTTACCAGTCATCAAAAAGGCTGGAGTTGAGCACAAGATTGATTTCATAGAGTCTCCAGCTCTACCAATTTTGGATAAGCTACTTGAAGATCCTGCAAATGAAGGATCTTTTGACTTTGCCTTCATTGATGCTGACAAGGAGAACTATGTGAACTACCATGAGAGGCTTATAAAGCTGGTCAAGATTGGGGGGTTGCTTGTGTATGACAACACACTGTGGGGTGGACGTGTTTGCTGGCCTGAAGACAAAGTTCCACCACACGCTAGATCAGGGAGGGACGCTGCAATTGAATTTAACAAAACAATCACAAACGATTCTCGTGTTGAATTTGCTCTTACTTCCGTAGGGGATGGGCTCAATATTTGTAGGCGCGTTGCTTGA 4422 0.4251 MSRAAASFGILLCLFLAAAAVVNCSDQANCSTTCIAEQCDTVGIKYGKYCGVGYWGCAGEKPCDDLDACCMAHDDCVDKFGMTHVKCHKKLKNCLTRELKSGKVGFSKECPYSRAAPTMIRGMDLAILLSQLGDSKLEKRFLRLVFVCQHETKPHHSYSFFDKQIKRIVSSSVRVFAQSMLHRSFKPAKCKTTLKLAVSRIKLLKNKREAQIKQLKRELAQLLESGQDRTARIRVEHVVREEKTMAAYDLVEIYCELIAARLPMIESQKNCPIDLKEAVSSVIFASPRCSDLPELMDVKKQITSKYGKEFVSAAIELRPDCGLVEKLSAKAPDGPTKIKILAAIAEEHNIKWEPKSLGENDVKSSQDFLVGPSTSEKVAYAEPSQIHVPPAHDEKGPSNLHAPSQVKPVHHSSTNSYEQTASGAARKDQSTTSGVSNSEVGSSGTGSQETKFQDSYSGNNSSFPMNRQNWSMEFKDAASAAEAAAESAERASMAARAAAELSNRENMTRQYSSGSHSSSRSGLRDERSQEYTFHDDKNLSTSPVDASFHRSSSGMHNEQITATEQDNLVGPPNEYYRNSHENVVRHAQSASLMPGSVFNDDKPFTDGSQMADIYQHNNSFGQKSSDLPEMSIKTQAGRSEEDFVTDLYDDSDLNAENNYHFGDARTNRQSSKVSSSHFITPTDDHNDNLDLDDWNTRNKAVEDPFVTDEVNTQRNNMETSSYNDTTVVFDDSGSEDDDHKFDVDKKYNGEGSSLFVSSPASKSQVDPFENTNSLAYGQNIDEKVTSSGTQSHFSVVSERLTSAVSSEKEDLPSVTFDDSDDPGSDSDMNFVNKSKVSGLSDYGKFFLDPIASHGVPGSSSRNEKNVGTDRKSWLSPLSVDSDTVEEHFERRVDTTTVSEKNLGYDDLPASQPPTKERSSILGLDLEANNDTETLEEYHKESGKELSYGTLKGGLRNKGFKRPPYIKNTLDDVSSSLGDTSVQNEGSLPTARTSIGSDARVQDKYTREVSRGNRNVGLGAHKIPSDSDSYRVVANSQETLASTNEPRIQKEQREVKKKSSSRASVTYFGSDNSDSEDELTKQNSPSLARPISGISRRTSASSKAATGLSSRDAPLSKASVTSAATLGWKSSRTSYESNNQNASTIMKSSENGTGSKPGSAKNKASEPISEPNRSLDGEISKSSARVQPFSSPKTVIQDNEEAQEVDGDTSSKQKVGHVHPKLPDYDSFAAHFLFREMENIKDPSIYRNPVILQSEDLTKYILETAVYPREPAPLKELREATNNHPWGFIATLPEAGQLMTLLLKLLNPKKTIEVGVFTGYSLLLTALNIPHDGKITAIDINRKTYEVGLPVIKKAGVEHKIDFIESPALPILDKLLEDPANEGSFDFAFIDADKENYVNYHERLIKLVKIGGLLVYDNTLWGGRVCWPEDKVPPHARSGRDAAIEFNKTITNDSRVEFALTSVGDGLNICRRVA 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00036 1473 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1253 1471 IPR029063 -
Gma01g00036 1473 Pfam O-methyltransferase 1263 1472 IPR002935 GO:0008171
Gma01g00036 1473 MobiDBLite consensus disorder prediction 716 744 - -
Gma01g00036 1473 MobiDBLite consensus disorder prediction 1028 1045 - -
Gma01g00036 1473 SUPERFAMILY Phospholipase A2, PLA2 45 103 IPR036444 GO:0004623|GO:0006644|GO:0050482
Gma01g00036 1473 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 182 1233 - -
Gma01g00036 1473 Coils Coil 198 225 - -
Gma01g00036 1473 MobiDBLite consensus disorder prediction 1060 1197 - -
Gma01g00036 1473 CDD PLA2_plant 30 133 - -
Gma01g00036 1473 MobiDBLite consensus disorder prediction 387 464 - -
Gma01g00036 1473 PANTHER IST1 FAMILY MEMBER 182 1233 IPR005061 GO:0015031
Gma01g00036 1473 Gene3D Vaccinia Virus protein VP39 1243 1473 IPR029063 -
Gma01g00036 1473 Pfam Regulator of Vps4 activity in the MVB pathway 191 351 IPR005061 GO:0015031
Gma01g00036 1473 MobiDBLite consensus disorder prediction 496 530 - -
Gma01g00036 1473 MobiDBLite consensus disorder prediction 405 464 - -
Gma01g00036 1473 MobiDBLite consensus disorder prediction 503 519 - -
Gma01g00036 1473 ProSitePatterns Phospholipase A2 histidine active site. 69 76 IPR033113 -
Gma01g00036 1473 MobiDBLite consensus disorder prediction 970 999 - -
Gma01g00036 1473 Gene3D - 178 362 IPR042277 -
Gma01g00036 1473 CDD AdoMet_MTases 1311 1415 - -
Gma01g00036 1473 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1249 1472 IPR002935 GO:0008171
Gma01g00036 1473 MobiDBLite consensus disorder prediction 970 1217 - -
Gma01g00036 1473 Gene3D Phospholipase A2 domain 16 139 IPR036444 GO:0004623|GO:0006644|GO:0050482
Gma01g00036 1473 MobiDBLite consensus disorder prediction 802 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00036 Gma-Chr1 438750 450960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00036 1250 1472 Monolignol Biosynthesis Gene Families AT4G26220 63.229 8.15e-96 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00036 - - gmx:100791547 2000.71