Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00015 ATGTCGAGGGTGAATTCAGAGAAGAAGCTGGGTGCAGGACGTGTGGTGGCTGTGGCAATTGAGAATAACAAGACAAGCCAACATGCTGCCAAATGGGCAGTGGACAATCTTCTTCCCAAAGACCAATGTCTCTTACTAATCCATGTTAGACAAAGACCATCTTCGGTTCCATCGTCGGATCATTTGAGCGAAGCTGTGGGCGACAACGAATCCAAGGAACTTTTTGAATCATTTCGAGTCTTCTGCAATAGAAAAAGTATACAATGCAAAGAAGTGCTGCTGGAGGACACGGATATATCTAAGGCATTAATAGACACCATTTCCACGAATACCATAGAGCTTCTTGTACTTGGGGCGCCCTCAAGGGGTGGCCTTGTTAGAAGATTTCGGACAACTGATGTCCCAAGCACTGTGTCCAAAGGGGCGCCACAATTCTGCACAGTTTATATAATTTCTAAAGGAAAAATCTTAAGTGTAAGATCTGCTACTGCTCCATTGGCTCCTAACAAAGCTGCCATTGCCGCTGCCGCCGCCGCTGCCACCACACCCCGTAACCAATTGCAGCCACAACAACAACCACACCCGCAGATAATGCGAAGTCCTGAAAGATTTTCAGATTCTCAGCCACCCCGCAACTACCCACCACGACGTATGTTATGCATTATTGGTGACGCATGCAGATCACCGTTCACAAGGGCTGGGAAAACATACGAGCCTTCAAAATTTCAGGATTCTGATATATCATTCGTGAGCAGCGGAAGGCCAAGTGTTGAACGAATGTTCCCAACATTGTACGAGGATCAGGACAGTGCGAGTGGAATTGCCCTGGGTAGGTTCTCAGATTACGATGGTAGGAACAGCTTCGCTTCTTCCTACTCTTCACAATCGCTGGGCATCGATGACCACTCCTTCTCCTCGCAATCGAGGTTATCCGATTGCACCGACGACGTGGAATTCGAGATGAGGAGGCTGAAGCTGGAACTGAAGCAGACAATGGAAATGTACAGCTCTGTCTGCAAGGAAGCCATGACCGCAAAGCAGAAGGCAATGGAGCTTCAACGTTGGAAAGTGGAAGAACAGAAGAAATTGGAAGACTCATCAATGTCGTCGTCCCCGGGTGAAGCTGTAACATCATCATCATCATCCATGGCACTGATGGAGATGGAGCAGGAAAAGATAAGAGAAGAAGCACTTCAAAAGATTGCAGCATTGGAAGCACAGAAGAGAATGAGTCTGCAGATGGAGAGGAAGAAGCCTGAGGAGAAGACCGTGAGTAGTTTTGGACACACTGCGAGGTACAGAAGATACACCATTGAGGAAATAGAAGAGGCAACAAACATGTTCTCGGAGTCTCTCAAGATCGGGGAAGGAGGGTATGGGCCAGTATACAGGTGCGAACTAGATTGCACCCAGGTTGCAATAAAGGTGTTGAAGCCAGATGCAGCACAAGGGAGAGAGCAGTTCCAGCAGGAGGTGGAAGTGCTGAGTTGCATAAGGCATCCAAACATGGTTCTTCTGCTGGGTGCGTGTCCAGAGTATGGGTGTCTGGTGTACGAGTACATGGCCAATGGAAGCTTGGACGACTGTCTGTTCCCAAGAGGAAAATCACGGCCACCTCTCCCATGGCAGCTGAGGTTCCAAATCGCTGCAGAGATAGCCACAGGTCTCCTTTTCCTTCATCAGACTAAACCGGAGCCACTGGTCCACCGCGACTTGAAACCCGGGAACATCCTCCTTGACCGCAACTACGTGAGCAAGATCAGTGACGTGGGCTTGGCCAGGCTTGTCCCTCCTTCGGTTGCAGACACTGTGACTCAGTATCGCATGACTTCCACAGCTGGAACATTCTGCTACATCGACCCGGAGTACCAGCAAACGGGCATGCTCGGAATCAAATCAGACATATACTCTCTCGGGATCATGCTTCTTCAATTGGTGACCGCCAAGCCTCCCATGGGTTTGACTCATCATGTTGGAAGGTCCATTGAGAAGGGCACTTTTGCAGAGATGCTTGACCCGGCCATTCCTGACTGGCCACTCGAACAGACCTTGCATTTCGCCAAGCTTTCCCTCGGATGCGCCGAGATGAGAAGAAAAGATCGACCAGATCTTGGAAAAGTTGTGTTGCCGGAGCTCAATAAGCTTAGGGCATTTGCTGAACAATGCATGTCACCTATGATGATGTTTGCACTTAGAAGTACTGGTGGTGGTGGTGGTGGTGCAGGATATGTTCCCAGAAACAGTAACTCTTCCGGACTTTCTTCTTCAACTCAAGACATGAGTGAAGTGTCTGGCTTCTCTGGATATGAAAGCCGCTCAAGCACATCATCGCTGGGGAGAATATGA 2346 0.491 MSRVNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRPSSVPSSDHLSEAVGDNESKELFESFRVFCNRKSIQCKEVLLEDTDISKALIDTISTNTIELLVLGAPSRGGLVRRFRTTDVPSTVSKGAPQFCTVYIISKGKILSVRSATAPLAPNKAAIAAAAAAATTPRNQLQPQQQPHPQIMRSPERFSDSQPPRNYPPRRMLCIIGDACRSPFTRAGKTYEPSKFQDSDISFVSSGRPSVERMFPTLYEDQDSASGIALGRFSDYDGRNSFASSYSSQSLGIDDHSFSSQSRLSDCTDDVEFEMRRLKLELKQTMEMYSSVCKEAMTAKQKAMELQRWKVEEQKKLEDSSMSSSPGEAVTSSSSSMALMEMEQEKIREEALQKIAALEAQKRMSLQMERKKPEEKTVSSFGHTARYRRYTIEEIEEATNMFSESLKIGEGGYGPVYRCELDCTQVAIKVLKPDAAQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFPRGKSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGRSIEKGTFAEMLDPAIPDWPLEQTLHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLRAFAEQCMSPMMMFALRSTGGGGGGAGYVPRNSNSSGLSSSTQDMSEVSGFSGYESRSSTSSLGRI 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00015 781 SMART serkin_6 448 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00015 781 Gene3D HUPs 14 152 IPR014729 -
Gma01g00015 781 Pfam Protein kinase domain 450 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00015 781 MobiDBLite consensus disorder prediction 181 207 - -
Gma01g00015 781 Coils Coil 387 407 - -
Gma01g00015 781 CDD STK_N 15 154 - -
Gma01g00015 781 MobiDBLite consensus disorder prediction 360 381 - -
Gma01g00015 781 Gene3D Phosphorylase Kinase; domain 1 417 520 - -
Gma01g00015 781 PANTHER OS02G0152300 PROTEIN 1 780 - -
Gma01g00015 781 MobiDBLite consensus disorder prediction 741 781 - -
Gma01g00015 781 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 130 - -
Gma01g00015 781 Pfam Universal stress protein family 14 143 IPR006016 -
Gma01g00015 781 MobiDBLite consensus disorder prediction 180 213 - -
Gma01g00015 781 SUPERFAMILY Protein kinase-like (PK-like) 424 708 IPR011009 -
Gma01g00015 781 MobiDBLite consensus disorder prediction 366 381 - -
Gma01g00015 781 MobiDBLite consensus disorder prediction 744 781 - -
Gma01g00015 781 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 780 - -
Gma01g00015 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Gma01g00015 781 ProSiteProfiles Protein kinase domain profile. 448 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00015 781 Gene3D Transferase(Phosphotransferase) domain 1 521 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00015 Gma-Chr1 304664 308474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00015 16 723 Receptor kinase-like Gene Family AT5G35380 56.731 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma01g00015 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00015 - - gmx:100785729 1421.76