Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00014 ATGGACTCAGACGCTGCTGCTGCGATTGCGATATGGAAAGAAATTGAGGCTTCAGAGAGCTACCTTGTTTGTTCTATGTACGAAGAAGCGGCAGAATTAGCTTCCTCTGTTTTGGAACGCTTGCGTCATGGCCATCATGATATCGATAGAGATATGTTGGAATCAAGTGCTATGGTGCTTCTTCAGGCATTCAACCAACTTCCCACCAAGACACCAGACATTCTTAATCAACTCAAACTACACTTTGTTTCACTCAAAGCTATTCCTACTCTTGTTCTTCTTACTGGAGCTTGTTTTCAAATAGCACAAGGTTCTGAATCTGCACTTGCCTCCGTTCAACAATTTCTCCACGACTTCCTTAATGGATGGTCTCTTGAACATTCACAATATTCTTCTGTCATTACCGAGGCTGCAAGTAGAGACCAAAGCCCCCGCTTCATTCTTCCAGTTGATGAATATTTGCAAGTTGTTGAGCTCTATGCCCTCACCCTTCTTGCAACAGTTCAAAAAGATGTTGATCTTGCAATCTCCTGGGTTGAGAATGCTTCATTGCCTGAGGAAAATCGACAGGGACTTCTGAGAAGTTTACACTCCATGCATTCTTCTAAAAGTACCATTTTGTCTCAAAGTTCCTTTCAGCAGTCACCCACAAATAGCAATGAAGCTTATCCTTTGAAAGAACAAAGTGTGTCTGAAGGATTACCAAAAGCCTTGAAAAGCAATGAAAAGTATAGGTCCAAAGAAGCTGTTACAAAACTGTCTGAACGAATAGAAGCATGTTTCTGGTGCTTCCGTGGTATCAATTTGAAGATTGGCACTACTAAGTTTGTCATAACTAGTGGGAAGATCATGCTTGGTTGTTTAATATTGTTCATCTATTATGTTTTCAGAAAGAAGCAAGCTACTTTAAACAGGATTGTAAGAAGACAGGCAATGGCCGTAAAGAGGGCTTTGGTAGATTTGTGGCAGCTTGCGTTTTCCTACCAAGTAAATCCTCTGGCAGCTGTTCAACCACTGTCTGCTGCAACACGTCAAGACACAGGATCTCTCCTCAAATTCAGAGACTCCCTTGAAAACAACAATGCATTGTTGTCCTCATGGAATGCATCCATCCCTCCATGTTCGGGTTCATCCCACTGGCCTCGCGTTCAGTGTTACAAGGGACACGTGTCGGGGTTGAAGCTCGAGAACATGAGGCTCAAAGGTGTCATTGACGTCCAATCCCTCCTGGAGTTACCATATCTCAGAACCATAAGCCTCATGAACAACGACTTCGACACTGAATGGCCTGATATCAACAAGATTGTGGGTTTGAAGACCCTTTTCCTTTCAAATAACAATTTCTCCGGGGAGATTCCGGCTCAGGCTTTTCAGGGCATGCAGTGGTTGAAGAAGATTCATCTCTCAAACAACCAGTTCACAGGTCCTATTCCAACTTCCCTCGCATCCATGCCTAGGCTTATGGAGTTGAGGTTGGAGGGAAACCAATTCACTGGCCCCATTCCCAATTTTCAACATGCATTCAAATCATTTAGCGTAGCCAATAATCAATTGGAGGGAGAAATACCAGCCAGCCTCCATAACATGCCACCTTCTTCTTTCTCTGGCAATGAAGGGGTATGTGGAGCACCGCTAAGTGCATGCTCCTCCCCAAAAAAGAAATCAACTGCGAGTATTGTTGCGGCAGCGGTTCTTGTTATTGTAGCACTGATAGTGATTGGAGCAGTAATATTGTTAGTCCTGCATCAAAGAAGAAAACAAGCTGGGCCAGAAGTGTCTGCGGAGAATCCATCATCAATAATGTTCCAATCCCAACAGAAAGAAGCCTCGTCTTCAGATGAAGGAAGTCGGGGGTCGCCTACTAGCTCGAGCCACAGAAGCAGAAGCTTGAGGCTATTGTTTGTGAGGGATGACAGAGAGAAGTTTGATTATAATGAACTGTTTAGAGCCTCAGCAAAGATGTTGGGCAGTGGTTGTTTCAGCTCTTCCTACAAGGTTGCTCTGTTGGACGGACCAGAGATGGTGGTGAAGAGATTCAAGCAGATGAACAATGTAGGGAGGGAGGAGTTTGATGAGCACATGCGACGGATTGGAAGGTTGAATCATCCTAATCTGCTTCCTCTGGTCGCCTACTACTACAGAAAGGTGGAGAAACTCTTGGTTACTGACTTTGTTCACAATGGAAGCTTGGCCGTTCGCCTTCACGGATACCAAGCTCTAGGACAAGAAAGCCTGGATTGGGCAAGCCGGTTGAAGATAGTGAAAGGCATAGCAAAAGGACTTGAACATCTGTACAAGGAGATGCCAAGCCTAATTGCGGCACATGGACATCTAAAGTCCTCCAACGTTCTTCTGAGTGAATCTTTGGAGCCCATCCTGACAGATTATGGGTTGGGGCCAGTGATAAACCAGGACCTTGCACCTGAAATCATGGTCATCTACAAGTCCCCAGAGTATGTGCAGCATGGGCGCATCACAAAGAAGACTGATGTGTGGAGTCTTGGGATACTCATTCTGGAGATTCTCACTGGCAAGTTCCCTGCTAACCTTCTACAAGGCAAAGGGAGTGAGTTGAGTTTGGCAAATTGGGTGCATTCGGTTGTCCCCCAAGAGTGGACTAGAGAGGTGTTTGATAAGGACATGGAGGGAACCAATAACAGTGAGGGGGAGATGGTCAAGCTTTTGAAGATTGCATTGGCTTGTTGTGAAGGAGATGTGGACAAGAGATGGGACTTAAAAGAAGCAGTAGAAAGAATTCATGAGGTCAACGAGGAGGAGGTGAAGTCATCACTTTCTCCATGGATGGTTAATTGA 2814 0.4495 MDSDAAAAIAIWKEIEASESYLVCSMYEEAAELASSVLERLRHGHHDIDRDMLESSAMVLLQAFNQLPTKTPDILNQLKLHFVSLKAIPTLVLLTGACFQIAQGSESALASVQQFLHDFLNGWSLEHSQYSSVITEAASRDQSPRFILPVDEYLQVVELYALTLLATVQKDVDLAISWVENASLPEENRQGLLRSLHSMHSSKSTILSQSSFQQSPTNSNEAYPLKEQSVSEGLPKALKSNEKYRSKEAVTKLSERIEACFWCFRGINLKIGTTKFVITSGKIMLGCLILFIYYVFRKKQATLNRIVRRQAMAVKRALVDLWQLAFSYQVNPLAAVQPLSAATRQDTGSLLKFRDSLENNNALLSSWNASIPPCSGSSHWPRVQCYKGHVSGLKLENMRLKGVIDVQSLLELPYLRTISLMNNDFDTEWPDINKIVGLKTLFLSNNNFSGEIPAQAFQGMQWLKKIHLSNNQFTGPIPTSLASMPRLMELRLEGNQFTGPIPNFQHAFKSFSVANNQLEGEIPASLHNMPPSSFSGNEGVCGAPLSACSSPKKKSTASIVAAAVLVIVALIVIGAVILLVLHQRRKQAGPEVSAENPSSIMFQSQQKEASSSDEGSRGSPTSSSHRSRSLRLLFVRDDREKFDYNELFRASAKMLGSGCFSSSYKVALLDGPEMVVKRFKQMNNVGREEFDEHMRRIGRLNHPNLLPLVAYYYRKVEKLLVTDFVHNGSLAVRLHGYQALGQESLDWASRLKIVKGIAKGLEHLYKEMPSLIAAHGHLKSSNVLLSESLEPILTDYGLGPVINQDLAPEIMVIYKSPEYVQHGRITKKTDVWSLGILILEILTGKFPANLLQGKGSELSLANWVHSVVPQEWTREVFDKDMEGTNNSEGEMVKLLKIALACCEGDVDKRWDLKEAVERIHEVNEEEVKSSLSPWMVN 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00014 937 Pfam Protein kinase domain 652 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00014 937 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 341 927 - -
Gma01g00014 937 SUPERFAMILY Protein kinase-like (PK-like) 652 921 IPR011009 -
Gma01g00014 937 MobiDBLite consensus disorder prediction 589 625 - -
Gma01g00014 937 Gene3D Ribonuclease Inhibitor 510 549 IPR032675 -
Gma01g00014 937 MobiDBLite consensus disorder prediction 592 625 - -
Gma01g00014 937 Gene3D Ribonuclease Inhibitor 345 509 IPR032675 -
Gma01g00014 937 Gene3D Transferase(Phosphotransferase) domain 1 725 932 - -
Gma01g00014 937 Pfam Leucine rich repeat 437 497 IPR001611 GO:0005515
Gma01g00014 937 PANTHER LRR RECEPTOR-LIKE KINASE 341 927 - -
Gma01g00014 937 SUPERFAMILY L domain-like 345 529 - -
Gma01g00014 937 Gene3D Phosphorylase Kinase; domain 1 618 724 - -
Gma01g00014 937 Pfam Leucine rich repeat N-terminal domain 345 385 IPR013210 -
Gma01g00014 937 ProSiteProfiles Protein kinase domain profile. 649 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00014 Gma-Chr1 292975 301420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00014 346 926 Receptor kinase-like Gene Family AT5G35390 51.400 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma01g00014 Pkinase 4.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00014 - - gmx:100785189 1114.37