Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00004 ATGGATAACGAGGTCGAGGTGCTAGAATTTGATATTGGGCTGGGAGGAGGCGAGGGAGAATATGACGATGACGACGGAGGAGGAATTGATGAGGAGGAATTGGGTGTAGCCACTGGAGGTGGGGAAATATATCTTCCTGAGGTGGACCTCTTAGATCTTGAACCTTGCGAGGGCATGGAATTCGAGTCTGAAGAGGCTGCCAAGGCCTTCTACAATTCCTATGCCCGTCGTGTTGGGTTTAGTACTCGCGTCAGCTCATCCCGTCGTTCCAGGCGCGATGGAGCTATTATACAGAGGCAATTTGTTTGCGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACGAAGGATAGAGAGATCAAGCGCCCACGAACAATTACCCGAGTCGGTTGTAAAGCCTCTCTTTCTGTCAAAATGCAAGACTCTGGCAAGTGGATCGTCTCTGGCTTTGTTAGAGAACATAATCACGAGCTCGTTCCACCAGACCAGGTGCATTGCCTTCGCTCTCACAGGCAAATTTCAGGAGCTGCCAAGACTCTCATCGATACTTTACAGGCTGCTGGGATGGGTCCTCGTAGAATTATGTCTGCACTAATTAAAGAGTATGGTGGGATTAGCAAAGTCGGCTTCACAGAGGTggactgtaggaattacatgaggaataataggctgagaagtttagaaggtgacattcaacttgttcttgattatttgagacagatgcatgccgaaaaccctaatttcttctatgctgtgcaaggagatgaggatcagtccataaccaatgttttctgggctgatcccaaggctaggatgaattatacattttttggtgatactgtaacctttgacaccacataccgatctaataggtatcggttaccatttgctttctttactggtgtaaaccatcatgggcaacctgttctctttggttgtgctttcctaattaacgaatctgaagcatcatttgtgtggcttttcaagacatggcttatggccatgtctggatgtccgccagtgtcaataacaactgatcatgattctgcaattcggtcagccataatacaagtcttccccgagactcgtcaccgtttctgcaagtggcacatCTTTAAAAAATGCCAGGAGAAGTTATCTCATATTTTCCTCCAATATCCAAATTTTGAAGCAGAATTTCACAAATGTGTTAACTTGACTGAGTCGACTGAGGAATTTAAGTCTTGCTGGTCAACACTTGTAGATAAATATGATCTCAGGGTCCATGAATGGCTTCAAGCAATATATTCTTCTTGTAGGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAAATGTCCATCACTCAGCGAAGTGATAGCATGAACTCTTACTTTGATGGGTATATAAATGCTTCAACCAATTTAAGTCAGTTCTTTAAGCTCTATGAGAAAGCACTTGAAAGTCGCAATGAGAAAGAAGTGAGAGCGGATTATGACACAATGAATACTTTGCCGGTATTGAGAACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACGAGAAAAATTTTCATGAGGTTCCAGGAGGAGTTAGTTGGGACACTTGCATTAATGGCATCCAAAGCCGATGATGATGGGGAGGTCATTACATATCATGTAGCTAAATTTGGAGAGGACCATAAAGGGTATTGTGTTAAATTCAATGTTCTGGAGATGAAAGCAACTTGCAGTTGCCAAATGTTTGAGTTTTCaggccttctttgtaggcatgttttggcagtctttagagttaccaatgtgcttactctcccatctcattatatattgaaacgttggacaagaaatgccaaaagCAATGTAATATTAGAAGAACATGCTTGTGATGTATATACTTACTATTTGGAATCTCATACAGTTAGATATAACACCCTCCGGCATGAGGCTCTTAAATTTGTTGATGAAGGCGCGCGGTCTGCTGAAACTTATGATGTCGCAATAGATGCTTTACAAGAAGCTGCAAAAAGAGTTTCTCAGGGAATACAAAATGAGGGAAAAATTCCTATCAGTAATGGAAAGGTAAGGAGTCACGTGCTGAATGATGAAAGTCATGCTAATTACACAAGTGGGTGCCAGGAAGCAAGCTTGAGCCAGCATATGTCTAAGGATGATTTGGATAATATTAGAAAACTTATGAATGAGCTTGAGTGTGCAAATCGGAAGTGTGAAATTTATCGGTCCAACCTGCTTTCAGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTTAAGGTGGAAAACATCAAGATAAGCATGAAAGATGGCATCTAA 2331 0.3209 MDNEVEVLEFDIGLGGGEGEYDDDDGGGIDEEELGVATGGGEIYLPEVDLLDLEPCEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRLRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQSITNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAFFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGCPPVSITTDHDSAIRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLQYPNFEAEFHKCVNLTESTEEFKSCWSTLVDKYDLRVHEWLQAIYSSCRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYINASTNLSQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLALMASKADDDGEVITYHVAKFGEDHKGYCVKFNVLEMKATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHACDVYTYYLESHTVRYNTLRHEALKFVDEGARSAETYDVAIDALQEAAKRVSQGIQNEGKIPISNGKVRSHVLNDESHANYTSGCQEASLSQHMSKDDLDNIRKLMNELECANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGI 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00004 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 33 749 - -
Gma01g00004 776 ProSiteProfiles Zinc finger SWIM-type profile. 562 598 IPR007527 GO:0008270
Gma01g00004 776 Pfam MULE transposase domain 282 375 IPR018289 -
Gma01g00004 776 Coils Coil 719 746 - -
Gma01g00004 776 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 749 IPR031052 GO:0006355
Gma01g00004 776 Pfam FAR1 DNA-binding domain 70 161 IPR004330 -
Gma01g00004 776 Pfam SWIM zinc finger 550 596 IPR007527 GO:0008270
Gma01g00004 776 SMART 26again6 573 600 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00004 Gma-Chr1 137035 148274 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma01g00004 MULE 1.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00004 - - gmx:100788220 1507.27