Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g2005 ATGCCCAGTAACGCGGGGCCTATCTTATCCCTGTCCAAAAGGAGATTCTTCTTTGCAGAGCAGATACTTCCTCAGCATCAATTAGCTGAAGCCTTACTCTCTCAAGGAACAAAGATGAAGATTTACCATCTAAACCACCCGGCCCAGCACTCCTCTTGGGCAAGAGTGTGCACCAGCACAAGGACTCAACTTCCTCATCCTGCGAAGCTTTTCTTTTGCCAGGCAAAACCTGATGGGTCATTGAACTTAAAGTTGATGCCTTCAACCCTGTTAGTGGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCTTGTTTTTGAAAAAACAAGGTCTGAGCAGTGCAGTTGCTGCAAGAATCATCAAGAAGTCAGACCTTTTTATCAGACACCTTGTCTCAAGGCTTCATTCGAAACATAAATCTCGGTATCTAGTAGGAAGAGAACTTACAACTCTTGAGATTAGGGATGCTCTAATTCCTTATCTTGAATCCCTTTTTGAAGAGCACGGAGACATTTTGGTGGGCGTAGTTGAAAACTATCCAAACTCTCCTGTCAAGGAAAAACCAGCAGTGCCAATTTCCATCCCTAATCCATTGGTGAATTCTAAGAAGATGAAAGCCAAGTCTCGAGTAAGTGAGATAGATCCAGCTGGGAAACTTCGCCCTCATATTGTCTATCTCTTGGAGCTTGGCATGGATATTGAGCAGATCAAGAGTATCACTCGAAGATTTCCATCCTTTGTGTACTATAGCTTAGAGAGGAAAATTAAGCCAGTGGTTGAATTTCTTCTAGAACTTGGGGTGCCAAAAGAAGACATTCCCATCATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGTCTCTCTGAAAATCTTAAACCCTCCATGAAGTTCTTGGAAACTTTAGGTGTGGACAAGCGGCAATGGGCAAAGGTGATATACCGATTTCCAGCTCTTCTAACTTACAGCAGGCAAAAAGTGAGGGCAAGTATAGATTTTCTTTATGAAATAGGCCTCACAGAGGAGAGCATAGGTAAGATTTTAACTCGTTTCCCCAGTATTATTAGTTACAGTGTAGAGGACAAGCTACGGCCCACAGCTAATTATTTCCGTTCATTGGGAGTTGATGTTGGCATTCTTGTATTTCGATGCCCACAGAATTTTGGTCTTAGCATTGAGTCCAATCTAAAGCCTGTAACAGAATTTTTCTTAGAGAGGGGATACACATTAGAGGAAGTTGGGACCATGATTTCGAGATACGGAGCCTTATATACTTTTAGCTTGCCAGATAATTTGATTCCGAAGTGGGAATTCTTTCTGACCATGGATTACCCCAAATCGGAGCTGGTTAAATTCCCTCAATTTTTTGGTTACAGTTTAGAAGAGAGGATTAAACCAAGATATGCTCGTGTGAAAGAGTCCAGAGTGAGATTACTGTTAAACCAGGTTCTGTCACTATCAAGTAGCGAATTTGATAAGGCCTTGAAAAAGAAAATCAAGAAAATGCAACTTGATCAGGATTCTAGTTATAGTATAAAAAATGTTTCATCAGAGAAAGAAAATTGA 1563 0.4107 MPSNAGPILSLSKRRFFFAEQILPQHQLAEALLSQGTKMKIYHLNHPAQHSSWARVCTSTRTQLPHPAKLFFCQAKPDGSLNLKLMPSTLLVAEKEEAKAVLTLFLKKQGLSSAVAARIIKKSDLFIRHLVSRLHSKHKSRYLVGRELTTLEIRDALIPYLESLFEEHGDILVGVVENYPNSPVKEKPAVPISIPNPLVNSKKMKAKSRVSEIDPAGKLRPHIVYLLELGMDIEQIKSITRRFPSFVYYSLERKIKPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPSMKFLETLGVDKRQWAKVIYRFPALLTYSRQKVRASIDFLYEIGLTEESIGKILTRFPSIISYSVEDKLRPTANYFRSLGVDVGILVFRCPQNFGLSIESNLKPVTEFFLERGYTLEEVGTMISRYGALYTFSLPDNLIPKWEFFLTMDYPKSELVKFPQFFGYSLEERIKPRYARVKESRVRLLLNQVLSLSSSEFDKALKKKIKKMQLDQDSSYSIKNVSSEKEN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g2005 520 FunFam Transcription termination factor MTERF5 chloroplastic 280 500 - -
Glsi14g2005 520 Gene3D Transcription termination factor 3, mitochondrial 277 500 IPR038538 -
Glsi14g2005 520 PANTHER CGI-12 PROTEIN-RELATED 197 495 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 Pfam mTERF 105 334 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 Pfam mTERF 226 404 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 Pfam mTERF 330 490 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 445 476 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 344 375 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 377 408 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Glsi14g2005 520 SMART mt_12 309 339 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g2005 Glsi-ChrGlsi14 30104860 30107569 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi14g2005 mTERF 1.3e-21 No_clan