Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1988 ATGACTGTGTCATCAAAAAGGAGAGGGGACAATGTTACTCTGGACTTTCTTGATGCAAATCAATCTAAGGATAGAAAAATTAGAAAGAGGAAGAAAAAGAGTAAAAGTGAAGGGAATGTAGAAGTTGAAAACTATGATATTTCTCAATTATCTGTTGAGCAAAGTAGCGGGACTGTGAAACAGGATGGAAATGAGATGGCTAATGCAATATTTTCTCAAGGTAGATCATTGTCAAATGGACTAGTTATTCAGGAGCTAGAAATGGGGACAGAAGATGGAAAAATTGCTGCATCCGGGAGAAAAATCAGTGTCCATTACATTGGCAAGCTGAAGAAAAATGGAGAAGTATTTGAGGCGAATGTTGGCCATGCTCCTTTCAAGTTTCGCCTTGGTAAAGGAGAAGTTATAGAGGGTTGGGATGTTGGCCTTGAAGGTATGCGCGTGGGAGAAAAGAGAAGACTCATAATCCCACCATCAATGGGGTTTGGCAGTGAAGGACACGGTGAAAATGTACCACCAAACTCATGGCTAGTTTATGACTTCGAATTGGTTAAAGTCCATTGA 564 0.4025 MTVSSKRRGDNVTLDFLDANQSKDRKIRKRKKKSKSEGNVEVENYDISQLSVEQSSGTVKQDGNEMANAIFSQGRSLSNGLVIQELEMGTEDGKIAASGRKISVHYIGKLKKNGEVFEANVGHAPFKFRLGKGEVIEGWDVGLEGMRVGEKRRLIIPPSMGFGSEGHGENVPPNSWLVYDFELVKVH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1988 187 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 95 184 IPR001179 GO:0003755
Glsi14g1988 187 Gene3D - 17 187 IPR046357 GO:0003755
Glsi14g1988 187 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 99 187 IPR001179 GO:0003755
Glsi14g1988 187 FunFam Peptidyl-prolyl cis-trans isomerase 73 187 - -
Glsi14g1988 187 SUPERFAMILY FKBP-like 74 186 - -
Glsi14g1988 187 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 23 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1988 Glsi-ChrGlsi14 26781164 26782518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1988 98 184 Calmodulin-binding Proteins AT5G48570 40.909 4.61e-18 79.3