Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1986 ATGATATCAGTGGCTCCTTCTGTTGAAACCCAACAAAACCCAGAATTCTCAGCTCCAGAACCTGCTAATGAGGAAAATTCACCTTCTCCGCAAATTACCCATCTGTTCAAATCAAAATTACCGGACATACCCATCTCCAACCACCTTCCCCTCCACACCTACTGCTTCGAGAACCTCTCTCAATTCTCTGACCGGCAATGTCTCATCGTCGGCTCCACCGGCAGAATCTACACTTACGCCGAAACCCACCTCATTTCGCGGAAGATCGCCTCCGGTTTATCCAAGCTCGGCATCAAGAAAGGCGATGTCATCATGATTTTGCTGCAGAACTCCGCCGAATTCGTCTTCTCATTCATGGCAGCCTCCATGATCGGCGTTGTCACCACCACCGCCAACCCATTCTACACCCCCGCCGAAATCTTCAAGCAGTTCACTGACTCAAAATCTAAGCTGATCATCACCCAATCCATCTACGTCGACAAGCTCCGAGAAAACGAGGACACTAACCCAAAACTTGGCGAGGAGTTTCAGGTTATCACCATCGACAACCCGCCGGAGAAGTGCTTGCATTTCTCGGTGTTGTCGGAAGCTGATGAAAGTGATTTACCGGAAGTGGACATAGATCCGGATGACCCAGTAGCGCTGCCTTTCTCTTCCGGCACCACCGGATTGCCTAAGGGTGTGATTCTGACCCATAAGAGCTTAACAACCAGCGTGGCTCAACAGGTCGACGGAGAAAATCCAAATTTGTACCTGAAGCCAGAAGACGTTCTGCTCTGCGTGCTTCCGTTGTTTCACATATTCTCACTGAACAGTGTTCTTTTGTGTTCTCTGAGAGCGGGGAGTGCGGTGTTGCTGATGCAGAAATTCGAGATAGGGGCGTTGTTGGATTTAACACGACGGCACAGGGTATCGGTGGCGATGGTGGTGCCGCCACTGGTGCTGGCGCTGGCAAAGAATCCGATGGTGGCGGAGTTCGATCTGAGCTCGATAAGATTGGTATTGTCAGGGGCGGCGCCGCTGGGGAAGGAGCTGGAGGAGGCTCTAAGGAGCAGGGTGCCTCAGGCAGTTTTGGGACAGGGATATGGAATGACGGAGGCAGGGCCGGTTCTATCAATGTGCTTGGGGTTTGCTAAGCAGTCATTCCCAATCAAGTCAGGCTCATGTGGCACTGTAGTAAGAAACGCAGAGCTCAAGGTCGTTGACCCAGAAACAGGTTGCTCTCTTGGCTATAACCAACCTGGTGAGATTTGCATCAGAGGACAGCAGATCATGAAAGGATATCTGAATGATGAAAAGGCCACAGCAGCAACTATTGATGTAGATGGTTGGCTTCATACTGGTGATATTGGCTACGTAGATGACGATGACGAGATTTTCATCGTTGACAGGGTTAAGGAACTCATTAAATTTAAAGGCTTCCAGGTGCCACCGGCAGAACTTGAAGGCCTTCTTGTAAGCCACCCTTCCATTGCAGACGCAGCTGTTGTTCCGAAAAAAGATGATGTTGCTGGTGAAGTTCCAGTTGCTTTTGTGGTTAGATCAAATGGCTTTGATCTTACTGAGGAGGCTGTAAAGGAATTCATAGCTAAAATGGTAGTGTTTTACAAAAGACTGCACAAAGTGTATTTTGTTCATGCAATTCCAAAGTCTCCATCCGGGAAGATATTGAGAAAAGACCTCAGAGCGAAGCTAGAGTGCGCCACGCAAATGCCTTGA 1719 0.4921 MISVAPSVETQQNPEFSAPEPANEENSPSPQITHLFKSKLPDIPISNHLPLHTYCFENLSQFSDRQCLIVGSTGRIYTYAETHLISRKIASGLSKLGIKKGDVIMILLQNSAEFVFSFMAASMIGVVTTTANPFYTPAEIFKQFTDSKSKLIITQSIYVDKLRENEDTNPKLGEEFQVITIDNPPEKCLHFSVLSEADESDLPEVDIDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLKPEDVLLCVLPLFHIFSLNSVLLCSLRAGSAVLLMQKFEIGALLDLTRRHRVSVAMVVPPLVLALAKNPMVAEFDLSSIRLVLSGAAPLGKELEEALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQSFPIKSGSCGTVVRNAELKVVDPETGCSLGYNQPGEICIRGQQIMKGYLNDEKATAATIDVDGWLHTGDIGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPKKDDVAGEVPVAFVVRSNGFDLTEEAVKEFIAKMVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLECATQMP 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1986 572 Gene3D - 27 465 IPR042099 -
Glsi14g1986 572 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Glsi14g1986 572 Pfam AMP-binding enzyme C-terminal domain 480 555 IPR025110 -
Glsi14g1986 572 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 33 563 - -
Glsi14g1986 572 FunFam 4-coumarate--CoA ligase 2 467 568 - -
Glsi14g1986 572 CDD 4CL 45 561 - -
Glsi14g1986 572 Pfam AMP-binding enzyme 57 471 IPR000873 -
Glsi14g1986 572 Gene3D - 466 568 IPR045851 -
Glsi14g1986 572 FunFam Long-chain-fatty-acid--CoA ligase FadD 37 466 - -
Glsi14g1986 572 MobiDBLite consensus disorder prediction 1 30 - -
Glsi14g1986 572 SUPERFAMILY Acetyl-CoA synthetase-like 46 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1986 Glsi-ChrGlsi14 25538490 25543686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1986 29 478 Monolignol Biosynthesis Gene Families AT1G65060 73.731 0.0 672