Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1972 ATGGAAGGAGGAGGAGCTGCTCAGCCTGCTGACACCGCTATGTCGGAGGCAGCGCAGCTAGATCCCCAACAACAACAGCAGCCTCCAACGGCTATGGGGATCGAGAATATCCCTGCAACTCTTAGTCATGGCGGCAGGTTCATTCAATACAATATCTTCGGTAATATATTCGAAGTAACGGCCAAATACAAGCCCCCCATCATGCCCATCGGTAAAGGCGCTTACGGTATCGTCTGTTCCGCTCTGAATTCGGACACGAATGAGCACGTAGCCATAAAGAAGATTGCCAATGCATTTGACAACAAAATTGATGCCAAGAGGACCCTCCGCGAAATCAAGCTGCTTCGACACATGGATCATGAAAACGTTGTTGCAATAAGGGATATAATACCACCACCTCAGAGGGAGGCATTTAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTTCACCAAATTATTCGTTCAAATCAAGCATTATCAGAGGAACACTGTCAGTATTTCCTGTATCAAATCCTCCGTGGGCTAAAGTACATACATTCAGCAAATGTTCTGCATAGGGACTTAAAGCCTAGCAATCTTCTCCTGAATGCCAACTGTGATCTAAAAATTTGTGATTTTGGGCTGGCTCGGGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTTTGTTAAACTCATCTGATTACACAGCAGCTATTGATGTATGGTCTGTTGGTTGTATATTCATGGAACTGATGGATCGAAAGCCATTGTTTCCTGGCAGAGATCATGTGCATCAGTTACGTCTCCTTATGGAGCTGATTGGCACCCCATCAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGACAACTACCTCTTTACCATCGCCAATCATTCCAAGGGAAGTTTCCACATGTCCATCCTGCAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGATCCTAGACAAAGGATTACTGTTGAAGATGCACTGGCACATCCCTACTTAACATCTTTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTTGACTTTGAGCAACATGCTTTGACTGAGGAACAGATGAAAGAGCTGATATACCGAGAGGCTCTTGCATTTAACCCTGAGTATCAGCATCAGTGA 1194 0.438 MEGGGAAQPADTAMSEAAQLDPQQQQQPPTAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSDTNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYHRQSFQGKFPHVHPAAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQHQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1972 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Glsi14g1972 397 CDD STKc_TEY_MAPK 57 392 - -
Glsi14g1972 397 ProSiteProfiles Protein kinase domain profile. 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1972 397 FunFam Mitogen-activated protein kinase 148 376 - -
Glsi14g1972 397 FunFam Mitogen-activated protein kinase 49 158 - -
Glsi14g1972 397 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 62 350 - -
Glsi14g1972 397 SUPERFAMILY Protein kinase-like (PK-like) 69 357 IPR011009 -
Glsi14g1972 397 Gene3D Phosphorylase Kinase; domain 1 47 386 - -
Glsi14g1972 397 ProSitePatterns Protein kinases ATP-binding region signature. 70 94 IPR017441 GO:0005524
Glsi14g1972 397 SMART serkin_6 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1972 397 ProSitePatterns MAP kinase signature. 99 202 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi14g1972 397 Gene3D Transferase(Phosphotransferase) domain 1 148 376 - -
Glsi14g1972 397 Pfam Protein kinase domain 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1972 397 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1972 Glsi-ChrGlsi14 21720305 21736376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1972 1 396 MAP Kinase Gene Family AT2G43790 87.626 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi14g1972 Pkinase 9e-74 CL0016