Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1949 ATGGACTCCCTCGTGGGAGCTCCCTCGTGGTCTTCTTTATCGCCGTTCACCGGCCGGGAGGATTGCTGGACTAAGGATGCTATCTACACTCTCATTGATGCTTGGGGTGAACGTCACATCTACCTCAGTTGCGGTAATCTCCGTCAGAAGCACTGGCAAGAGGTCGTCGACGTTGCTAATACCTTGCCCATGTTATCAGCAGATGACTTTAAACTACAACTTTCACCGGTGCGTGGCAACAAATGA 246 0.5122 MDSLVGAPSWSSLSPFTGREDCWTKDAIYTLIDAWGERHIYLSCGNLRQKHWQEVVDVANTLPMLSADDFKLQLSPVRGNK 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1949 81 Pfam Myb/SANT-like DNA-binding domain 20 59 IPR044822 -
Glsi14g1949 81 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 61 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1949 Glsi-ChrGlsi14 20188708 20189815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1949 18 61 Trihelix Transcription Factor Family AT3G14180 59.091 2.60e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi14g1949 Myb_DNA-bind_4 7.2e-07 CL0123