Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1947 ATGATTCAAGCTCAGGTATTTGAATCATACACTCGTTTTGACAAAGAACTAGCATGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCGCACATACATGGACAGGGTATAATTCATCGGGACTTGACACCAAGTAACATATTTTTTGATGCTCGCAATGATATCAAAATTGGTGATTTTGGTCTGGCCAAGTTCTTGACGTTGGAGCAGATGGATCAAGATCCAGGACATCCTGCTGATACAAGTGGAGTTTCCATCGATGGCACTGGACAAGTTGGCACATATTTCTATACAGCACCTGAAATTGAGCAAGGATGGCCAAAGATTGATGAAAAGGTTGATATGTACAGCTTAGGAGTGGTCTTTTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATATTGTATTATCTGATCTGAAACAGAAAGGAGAACTTCCTCCTTCTTGGGTTGCTGAGTTTCCAGAACAGGCATCCTTGCTGCAGCACTTAATGTCTTTAAGTCCATCTGATCGTCCTTCTGCGACTGAACTTTTACAGGAAGCATTTCCTCCACGAATGGAGTCTGAGTTATTAGATGGCAAGTGA 594 0.4242 MIQAQVFESYTRFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLTLEQMDQDPGHPADTSGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKVDMYSLGVVFFELWHPFGTAMERHIVLSDLKQKGELPPSWVAEFPEQASLLQHLMSLSPSDRPSATELLQEAFPPRMESELLDGK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1947 197 FunFam eIF-2-alpha kinase GCN2 2 195 - -
Glsi14g1947 197 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1947 197 SUPERFAMILY Protein kinase-like (PK-like) 11 182 IPR011009 -
Glsi14g1947 197 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 15 189 - -
Glsi14g1947 197 ProSitePatterns Tyrosine protein kinases specific active-site signature. 37 49 IPR008266 GO:0004672|GO:0006468
Glsi14g1947 197 SMART serkin_6 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1947 197 Pfam Protein kinase domain 10 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1947 197 Gene3D Transferase(Phosphotransferase) domain 1 3 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1947 Glsi-ChrGlsi14 20160223 20168722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1947 4 185 MAP Kinase Kinase Gene Family AT4G26070 29.534 1.63e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Glsi14g1947 Pkinase 1.8e-31 CL0016