Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1939 ATGCCTGTGAAGGACCCTGAACCTCTTACACAAGCTACTGTTTCAGTATCTCTGACACCTTGTAGCGAAGGTGAAAATTTGGCAATGAATTTGGAGGATGATGACGTTTGTTTGGTGGGAGACCAGCTTGTGCACTTAAGAAGCGTTTGTGGGCAAGAATTGAAGAAAGCCATTTCTTCTTCAGTTGATTGTAATGAAGATTCAAAATCAATGGCCATGGGTGACAGATCGTGCCAGACACCCTGCCTTGGGACCAAGGCACAGGATTGTCCTGAACAAGGCATTCTGGGTTCTGTTCTTGCAAAAGAAGGGGACAGATGGGATCTGAACAACGTTGTTCTCAGAGCAGAAAAGTCTTGCTGCAATATTATTGGCCAGAGTTCAAGCTCCTTGATTGCTGATGAGATGGAAAATGGTGTGGATTGGGACAATGGAGTTGTCGAGCATTACCAGCTTTCTTCTTCAAGCATGACAGATTCATCCGATGATTATGATTCAGTGATGGATGGCCGTTCGTCAGACTCTCAGAGCTTTGAGAACCAGAAGCATTCCAAAGTCCAATCAACCTGTCTCGATAATGGGTCAAAAATATTTGCCAAAGCTACTTACAAAGAAGATACCATTCGTTTCAAGTTTGATCCGTCTGCAGGTTGTTTCCAACTGTATGAAGAAGTTGCATCAAGATTTAAATTACAAAGTGGATCATTCCGGCTCAAATATTTAGATGATGAAGAGGATGGGTGA 744 0.4301 MPVKDPEPLTQATVSVSLTPCSEGENLAMNLEDDDVCLVGDQLVHLRSVCGQELKKAISSSVDCNEDSKSMAMGDRSCQTPCLGTKAQDCPEQGILGSVLAKEGDRWDLNNVVLRAEKSCCNIIGQSSSSLIADEMENGVDWDNGVVEHYQLSSSSMTDSSDDYDSVMDGRSSDSQSFENQKHSKVQSTCLDNGSKIFAKATYKEDTIRFKFDPSAGCFQLYEEVASRFKLQSGSFRLKYLDDEEDG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1939 247 Gene3D - 193 247 - -
Glsi14g1939 247 MobiDBLite consensus disorder prediction 154 184 - -
Glsi14g1939 247 Pfam PB1 domain 200 246 IPR000270 GO:0005515
Glsi14g1939 247 MobiDBLite consensus disorder prediction 170 184 - -
Glsi14g1939 247 PANTHER PROTEIN NLP8 68 246 IPR045012 GO:0003700
Glsi14g1939 247 SUPERFAMILY CAD & PB1 domains 193 246 - -
Glsi14g1939 247 ProSiteProfiles PB1 domain profile. 196 247 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1939 Glsi-ChrGlsi14 19937307 19938050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1939 118 246 NLP Transcription Factor Family AT2G43500 45.736 1.27e-23 97.4