Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1934 ATGGCTAACCCATCTGGGAACCATCAGGACCAGACCCATGTTTCGTCTTCGTTCAACGGGGTTACTGGAGCCAATCCCAACAACGGGAATTCGGCTCCGGAGAGTTCAGGTGCGGCTCCGGCCATGAAGCACAATCCTGGTATATCCGTGGATTGGACGCCAGATGAGCAGGCCATACTTGAAGATGGACTCGCAAAATTTACCTCAGAATCTACCATCATACGCTATGCTAAGATAGCACTACAGCTACAGAATAAGACAGTCCGGGATGTAGCACTGCGAGCCAGATGGATGAATAAAAAAGAAAATAGCAAGAGAAGGAAGGATGATTTGACAAGGAAAAGTAAAGATAAAAAGGAAAGAGTTTCTGATCCTTCAGCAAAATCATCTCACTTTGCCACCCGGCCCAATGTTTCCCCATATGCTTCACCAATGATTATGATGGACAATGATGATGGCATTTCTTACAAAGCTATTGGAGGTCCCACAGGTGAGCTATTGGAGCAAAATGCACAGGCCTTGAATCAAATCTCTGCAAATCTTACTGCTTTCCAGATACAGGAGAACATCAATCTTTTCTGTCAAACAAGAGATAACATTATTAAAATAATGAATGATTTGAATGACCTGCCCGAGGTGATGAAGCAAATGCCACCTCTTCCTGTGAAGGTGAATGAAGAGCTAGCTAACTCCATGCTTCCAAGAACAAACCTCCCAACGCAATCATGA 729 0.4431 MANPSGNHQDQTHVSSSFNGVTGANPNNGNSAPESSGAAPAMKHNPGISVDWTPDEQAILEDGLAKFTSESTIIRYAKIALQLQNKTVRDVALRARWMNKKENSKRRKDDLTRKSKDKKERVSDPSAKSSHFATRPNVSPYASPMIMMDNDDGISYKAIGGPTGELLEQNAQALNQISANLTAFQIQENINLFCQTRDNIIKIMNDLNDLPEVMKQMPPLPVKVNEELANSMLPRTNLPTQS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1934 242 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 13 239 - -
Glsi14g1934 242 SMART sant 48 101 IPR001005 -
Glsi14g1934 242 Coils Coil 94 121 - -
Glsi14g1934 242 Pfam Protein of unknown function (DUF3755) 183 216 IPR022228 -
Glsi14g1934 242 CDD SANT 52 101 IPR001005 -
Glsi14g1934 242 Gene3D - 52 128 - -
Glsi14g1934 242 MobiDBLite consensus disorder prediction 1 50 - -
Glsi14g1934 242 SUPERFAMILY Homeodomain-like 51 101 IPR009057 -
Glsi14g1934 242 MobiDBLite consensus disorder prediction 99 143 - -
Glsi14g1934 242 MobiDBLite consensus disorder prediction 1 35 - -
Glsi14g1934 242 MobiDBLite consensus disorder prediction 99 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1934 Glsi-ChrGlsi14 19881594 19890541 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi14g1934 DUF3755 2.2e-18 No_clan