Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1925 ATGGACAAGGACAAATCTCCCGGTCACAGTGGAGGTCTCCCACCTCCTTCAGGCCGTTATTCAGGTTTTTCGCCAACTGGAAGCACCTTCAACGTGAAATCAGAGCCATCACCCTCATCATCATCCTATCCTCCACTGGTGCCGAGTACGAGCTCAGACTCTGGTCACTTTGGGCATGGAATGTCCGCAGACTCTAGTAACTTTAGTCAAGATATTAGCAGAATGCCTGATAATCCTCCAAGAAATAGAGGTCATAGACGTGCCCATTCTGAGATTCTTACCCTACCCGATGATATTAGCTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGAACGGCCCTCATTTTCCGATGAAACTGAGGAAGACTTTCTGTCAATGTACCTTGATATGGATAAATTTAATTCATCATCTGCTACATCAGCATTTCAAGTGGGCGAGCCATCTGCTGCTGCAGCATCTGGAGTAGCCACCTCTTCTGCTGACAACCTTGCTATCGGTACTAATGAAAGGCCCAGAGTTAGGCACCAACATAGCCAGTCCATGGATGGGTCAGCGACCATCAAACCAGAGATGCTAGTCTCAGGTTCGGAAGACATCTCCGCAGCTGATACCAAAAAAGCAATGTCAGCTGCCAAGCTTGCAGAACTTGCCTTAATTGACCCCAAGCGTGCAAAAAGGATTTGGGCTAATAGGCAGTCTGCCGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAACGGAAGGTGCAGACATTGCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGGTTGACTGCTGAGAACAGTGAGCTGAAGCTAAGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAATGATGCGTTGAAAGAGGAAATTCAGCATTTGAAAGTACTTACTGGGCAAGCTATGCCGAATGGAGGGCCTATGGTGAACATTTCTTCTCTTGGAGGCCAGCAATTCTATTCCAACAGTCATGCCATGCACACTCTTTTAGCTGCACAACAGTTTCAACAGCTCCAAATTCATTCTCAAAAGCATCAGCATCAGTTTCAGCAGCATCAACTGCATCAGCTTCAGCAGCAGCAACAGATGGGGGACCTGAAAATGAGAGGATCCATGCCTTCTCCAGGTCCTAAAGATAATGCTTCATAA 1203 0.4663 MDKDKSPGHSGGLPPPSGRYSGFSPTGSTFNVKSEPSPSSSSYPPLVPSTSSDSGHFGHGMSADSSNFSQDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGAERPSFSDETEEDFLSMYLDMDKFNSSSATSAFQVGEPSAAAASGVATSSADNLAIGTNERPRVRHQHSQSMDGSATIKPEMLVSGSEDISAADTKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMVNISSLGGQQFYSNSHAMHTLLAAQQFQQLQIHSQKHQHQFQQHQLHQLQQQQQMGDLKMRGSMPSPGPKDNAS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1925 400 FunFam probable transcription factor PosF21 222 275 - -
Glsi14g1925 400 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 18 381 - -
Glsi14g1925 400 Pfam bZIP transcription factor 223 277 IPR004827 GO:0003700|GO:0006355
Glsi14g1925 400 MobiDBLite consensus disorder prediction 21 76 - -
Glsi14g1925 400 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Glsi14g1925 400 Coils Coil 239 308 - -
Glsi14g1925 400 MobiDBLite consensus disorder prediction 361 385 - -
Glsi14g1925 400 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Glsi14g1925 400 MobiDBLite consensus disorder prediction 361 400 - -
Glsi14g1925 400 MobiDBLite consensus disorder prediction 157 184 - -
Glsi14g1925 400 MobiDBLite consensus disorder prediction 1 95 - -
Glsi14g1925 400 Gene3D - 222 275 - -
Glsi14g1925 400 SUPERFAMILY Leucine zipper domain 223 274 IPR046347 GO:0003700|GO:0006355
Glsi14g1925 400 MobiDBLite consensus disorder prediction 78 93 - -
Glsi14g1925 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1925 Glsi-ChrGlsi14 19735621 19739565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1925 19 350 bZIP Transcription Factor Family AT1G06070 71.343 1.94e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi14g1925 bZIP_1 1e-08 CL0018