Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1911 ATGAATAGTTTTGATGATGATGATGGCGGAGAAGAGCCACTTGCTCAAAATCTCTCACCTGTTGCCCAAATTACTAAAGTGAAGGTTGAGGTGAACCAGCAGGCTAAGGTTATGCCATCCATGAATGACGAACCCCTGCTTCTGCAGCAGCAGCAGCACAACGACAGTATCAATAATTTTTACCAAAGCTCAGCGCGACCACCTTTGCCAAATCAGAGGACCTCAGCAGCATATCCAGTGGGAATTGGAAATACTAGTAATCTTATCAGGCATAGCAGCTCCCCTCCGGGACTCTTTTCCCAAATCAACATTGAAAATGACTATGCTGGCATGAGAGACATGGCTAGTGAAGAAGCACGCTTTTCTCCTGCAAGGCTAATGTCATCAATAGCTGAAATTGGAGATAAAAGCAGCAGAGAAAACAGTGAAGCATTTGCTGAAAGGCAGGATAATGATTTTGTCACGGGTTTGGCTTGGGATGATGAGGCAAAAACATTTTCTGGTTTAAGTGCAGCTGAAACTCAGAATGAGACAGGAAGCGATCCGGCTGCTCCTTTGGCTCATCACTTGAGTTTGCCAAAAACTTCAACGGAGATGGCAGCCATTGAGAAGTTGTTGCACTTCTCAGATTCTGTTCCCTGTAAAATTCGTGCCAAGCGGGGCTGTGCCACTCATCCTAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATTAGCGAGCGTATGAGGAAACTACAAGACCTGGTTCCCAACATGGACAAGCAAACAAATACGGCTGACATGCTGGACTTGGCTGTAGAGTATATTAAAGACCTCCAAAAGCAGGTTCAGACACTTACAGACAGTCAAGCCAAGTGTACGTGTTCACAGAAGCAGCATCAATAA 885 0.4508 MNSFDDDDGGEEPLAQNLSPVAQITKVKVEVNQQAKVMPSMNDEPLLLQQQQHNDSINNFYQSSARPPLPNQRTSAAYPVGIGNTSNLIRHSSSPPGLFSQINIENDYAGMRDMASEEARFSPARLMSSIAEIGDKSSRENSEAFAERQDNDFVTGLAWDDEAKTFSGLSAAETQNETGSDPAAPLAHHLSLPKTSTEMAAIEKLLHFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQKQVQTLTDSQAKCTCSQKQHQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1911 294 Pfam Helix-loop-helix DNA-binding domain 227 273 IPR011598 GO:0046983
Glsi14g1911 294 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 225 285 IPR036638 GO:0046983
Glsi14g1911 294 MobiDBLite consensus disorder prediction 1 22 - -
Glsi14g1911 294 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 222 272 IPR011598 GO:0046983
Glsi14g1911 294 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 289 - -
Glsi14g1911 294 Gene3D - 223 294 IPR036638 GO:0046983
Glsi14g1911 294 SMART finulus 228 278 IPR011598 GO:0046983
Glsi14g1911 294 FunFam Transcription factor bHLH130 family 223 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1911 Glsi-ChrGlsi14 19561334 19562773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1911 87 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 51.293 2.78e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi14g1911 HLH 2.5e-10 No_clan