Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1905 ATGAATACTCACAGCAGCCCGAAGGTCGCAGATTTTCTGGGAGTGAGCAAGTCTGAAAATCAGTCAGGTCTTGCAGCGCTTGATGAAATTCAATCAAATGATTCGGCATACCTATTCACAAACAATAGTATAACCCCAGTTGTAGCCACATGTAGCAACTACGAGTATCAAGAACAGGCCAATAGTAATTTGCAGTCATTGACATTATCCATGACTAGTAGTGGTGGTAAGGATTCGACTTCTGAAACCAGCAGAGATAACACTTACAATACTGTTGAAGCTGCACCCAGAAGGACTTTGGATACCTTTGGCCAGAGAACATCCATATATCGTGGTGTCACAAGACATAGATGGACCGGAAGGTATGAAGCTCATCTTTGGGATAATAGCTGTAGGAGGGAAGGGCAATCAAGGAAAGGTCGCCAAGGTGGGTATGACAAAGAAGAGAAAGCAGCTAGGTCCTATGACTTAGCTGCACTAAAGTACTGGGGAACATCCACCACCACCAACTTTCCAATAAGTAACTATGAGAAGGAATTGGAAGAAATGAAGCACATGACAAGACAAGAATTTGTGGCCGCCATAAGGAGAGTAGTGGATTCTCAAGGGGCGCATCAATGTATCGCGGAGTCACAAGGTACCGAGGAAGAAGCTGCAGAAGCTTATGACATGGCGGCGGTAAAGTTCAGAGGTCTTAACGCAGTGACCAACTTTGACATGAGTCGTTACGATGTGAAAGCCATTCTTGAAAGCAACAGTCTTCCCATCGGAGGAGGTGCTGCCAAACGACTAAAGGAGGGTCAAGCTCTCGAGTATTCCAGAAAACGAAAGCAAATGCCACCATTTGGCTCCAGCTCCAGCTCCCCCTCCACCACCGGCCTTCAAGCCTACTCCTTCGCCGATCTACAGAACCAGGACAATATTATTTCTCACTACACCCAGGACATCCCTTCATCATTTCATCAGAGTTATATCCAAACCCAGCAATCAGCTCAGAATGCTCAGTTTTATTATAGCTACCTTCAGAATCACCCTGCTATGTTTCAGGGACTCGTAAACATGGGCTTTTCTTCGAGTAATCATTATAGTGGAAGTGGAGGTTTCATGGGGAATGGAGTTGGGATGCCTCTGAATTCCACATCGGTGGTCAAGGTTGACTATGACATGCCTTCCGATGGTTATGGCGGGTGGGCGGCGGCGGCGGCGGAGAACTCCATGCAGCCACCAAATGCTGGTGTTTTTACCATGTGGAATGAGGTCTCAGCAGAATGCGACATTAGTTTTCGGAAGAATTGTCAATGTCAGGCGCAACATCCGCATCCAGAAGTGGAGGAGAAAATCTGTTCTAATCGCTATCGACATAATCCTGATGGATGGACACTTTGCAGCACCAGATTCGCATCCATAGCAGAAAAGGCGGAGCAGGGATGTGCTGAGTCTTTCATTCAGAATAGTGCCGAGGGTAGACAGGTTACGAGGAGCATCTGATACGAGTCTCTTTGGAGCTTGACTCTGTTGTGCACGTTCATCACAATTCCATTTCTTCTGACCTTGTTTCAAGCAAAATTGAGATGGCAACTAGAAGCGATCTGTTTTTTATCCCTGATTGCAGGAGACGGCAATGAAACCACAACAATAATTTACAAATCTTACCACATGTCCATGGATTCTGTTCAAATCATCTGTAAATTGCACATACCATTCTGA 1707 0.4581 MNTHSSPKVADFLGVSKSENQSGLAALDEIQSNDSAYLFTNNSITPVVATCSNYEYQEQANSNLQSLTLSMTSSGGKDSTSETSRDNTYNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARSYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRVVDSQGAHQCIAESQGTEEEAAEAYDMAAVKFRGLNAVTNFDMSRYDVKAILESNSLPIGGGAAKRLKEGQALEYSRKRKQMPPFGSSSSSPSTTGLQAYSFADLQNQDNIISHYTQDIPSSFHQSYIQTQQSAQNAQFYYSYLQNHPAMFQGLVNMGFSSSNHYSGSGGFMGNGVGMPLNSTSVVKVDYDMPSDGYGGWAAAAAENSMQPPNAGVFTMWNEVSAECDISFRKNCQCQAQHPHPEVEEKICSNRYRHNPDGWTLCSTRFASIAEKAEQGCAESFIQNSAEGRQVTRSIXYESLWSLTLLCTFITIPFLLTLFQAKLRWQLEAICFLSLIAGDGNETTTIIYKSYHMSMDSVQIICKLHIPF 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1905 568 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 213 321 - -
Glsi14g1905 568 MobiDBLite consensus disorder prediction 65 86 - -
Glsi14g1905 568 FunFam AP2-like ethylene-responsive transcription factor ANT 108 174 - -
Glsi14g1905 568 ProSiteProfiles AP2/ERF domain profile. 109 172 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 SUPERFAMILY DNA-binding domain 213 241 IPR016177 GO:0003677
Glsi14g1905 568 SUPERFAMILY DNA-binding domain 108 174 IPR016177 GO:0003677
Glsi14g1905 568 Pfam AP2 domain 109 164 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 Gene3D AP2/ERF domain 183 241 IPR036955 GO:0003700|GO:0006355
Glsi14g1905 568 Gene3D AP2/ERF domain 109 174 IPR036955 GO:0003700|GO:0006355
Glsi14g1905 568 SMART rav1_2 109 178 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 SMART rav1_2 183 245 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 MobiDBLite consensus disorder prediction 267 290 - -
Glsi14g1905 568 PRINTS Ethylene responsive element binding protein signature 221 241 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 ProSiteProfiles AP2/ERF domain profile. 161 239 IPR001471 GO:0003700|GO:0006355
Glsi14g1905 568 CDD AP2 108 174 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1905 Glsi-ChrGlsi14 19457474 19462770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1905 7 419 AP2-EREBP Transcription Factor Family AT1G51190 52.427 1.62e-142 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi14g1905 AP2 1.6e-08 CL0081