Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1904 ATGTCAGGAGAGAGAAACCGACGGAAACAATTGCGTTTCGCTCTTCCTCTCTCTCCACCGTCGTTGGCTTTGTTTTCTCTCTCCTCATCGATCCCAAATCTTCCTAGGGTTAGGGTTCCGTTACCCTTATCTTCTATTTTTTTTTCTTCCTGGCCAACAGGAAAGTTGAAGATGGACCATGACAAGACTGGATGCCAAGCTCCCCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTTGGAAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGATATGATGCTGAAACAGGAGCAGGCCAAGCTTGCTGCATCTTCCATTGGGAATATTATGAATGGTACATCAAGCAGCAGTGGAAATGAACCTGTTGTTGCTGCCAATGTGGATATCCCAGTCAATTCAGTAGAGCCTAGAACTATCTCTGCACAATTTTTATTTTCTTCAGGCTCAGAGGAGAGTGGTGAGGCAAAGCCAAAGGATGGTCCAAAACGCTGCAGCAGCTGCAACAAGCGGGTGGGTTTGACAGGTTTTAATTGTCGGTGTGGTAACCTTTTCTGTTCTGTACATCGCTACTCAGACAAGCATGATTGCCCGTTTGATTACCGCACTGCTGCACGAGATGCCATTGCTAAAGCAAACCCAGTTGTCAAAGCTGAGAAGCTTGATAAGATCTAG 690 0.4565 MSGERNRRKQLRFALPLSPPSLALFSLSSSIPNLPRVRVPLPLSSIFFSSWPTGKLKMDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSIGNIMNGTSSSSGNEPVVAANVDIPVNSVEPRTISAQFLFSSGSEESGEAKPKDGPKRCSSCNKRVGLTGFNCRCGNLFCSVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1904 229 ProSiteProfiles Zinc finger AN1-type profile. 164 210 IPR000058 GO:0008270
Glsi14g1904 229 FunFam Zinc finger AN1-type containing 6 145 225 - -
Glsi14g1904 229 PANTHER AN1-TYPE ZINC FINGER PROTEIN 70 229 - -
Glsi14g1904 229 SUPERFAMILY AN1-like Zinc finger 155 224 IPR035896 -
Glsi14g1904 229 Gene3D - 150 225 IPR035896 -
Glsi14g1904 229 SMART A20_3 72 96 IPR002653 GO:0003677|GO:0008270
Glsi14g1904 229 ProSiteProfiles Zinc finger A20-type profile. 69 103 IPR002653 GO:0003677|GO:0008270
Glsi14g1904 229 SMART AN1_Zf_4 170 207 IPR000058 GO:0008270
Glsi14g1904 229 Pfam A20-like zinc finger 73 96 IPR002653 GO:0003677|GO:0008270
Glsi14g1904 229 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 74 110 - -
Glsi14g1904 229 Pfam AN1-like Zinc finger 170 206 IPR000058 GO:0008270
Glsi14g1904 229 Gene3D - 58 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1904 Glsi-ChrGlsi14 19454616 19457176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1904 65 229 C2H2 Transcription Factor Family AT3G52800 42.197 9.33e-36 122