Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1900 ATGACCCATCCCTACTACTCCAATGTTCTCTATGGTTGGTTTGACCTCCAATCTCCCTGCCTTCTCTCTTCTTCATCATCTTGTTCCAATCCACCAATCTACTTTCCTTCTAGCTATCAATATCATATACCCTCACCCTCCTCTCCTACTCTGAGAGAAGCCCTTCCTCTCCTTAAACCAAGCCCTACACGACATGAACATCCTGAATCTTCCTTTGGTACCAACAAGCTGCAGGAGAAAGAAGGAAGCATCTCGTCTAGCTCTTTGGATGATGACACTGTGACGGTGGCTTTACACTTAGGGCTTCCAAGCCCGAGATACAACAACATGCAGATGCATATGTGGGGGCATGGACCTGAGTATAGAAAGGGGCCAGAGTCTCTAAGGGAAACACAGCCCACAGCTATGCTTAGGCTTCCTTGCTATTGCTGTGCAGCCGGATGCAAGAACAACATTGAGCATCCAAGAGCCAAACCACTCAAAGACTTCAGAACCCTTCAAATCCATTACAAGAGAAAGCATGGAACGAAGCCTTTCATGTGTAGAAAATGTTGCAAAGCATTTGCTGTAAGAGGTGACTGGAGAACTCATGAGAAGAACTGTGGGAAGCTCTGGTATTGCTCCTGTGGCTCTGATTTCAAGCATAAAAGATCTCTTAAGGATCATATCAAGGCATTTGGACACGGCCATATCAACAAAATGAATTAA 708 0.4534 MTHPYYSNVLYGWFDLQSPCLLSSSSSCSNPPIYFPSSYQYHIPSPSSPTLREALPLLKPSPTRHEHPESSFGTNKLQEKEGSISSSSLDDDTVTVALHLGLPSPRYNNMQMHMWGHGPEYRKGPESLRETQPTAMLRLPCYCCAAGCKNNIEHPRAKPLKDFRTLQIHYKRKHGTKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHGHINKMN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1900 235 PANTHER ZINC FINGER PROTEIN WIP2 106 232 IPR043584 GO:0003700|GO:0010468
Glsi14g1900 235 Gene3D Classic Zinc Finger 138 227 - -
Glsi14g1900 235 MobiDBLite consensus disorder prediction 59 74 - -
Glsi14g1900 235 MobiDBLite consensus disorder prediction 59 88 - -
Glsi14g1900 235 SUPERFAMILY beta-beta-alpha zinc fingers 161 199 IPR036236 -
Glsi14g1900 235 FunFam Zinc finger protein WIP2 148 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1900 Glsi-ChrGlsi14 19394516 19396130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1900 106 231 C2H2 Transcription Factor Family AT1G51220 87.302 2.64e-83 250