Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1870 ATGGGGGAGGAGGTGAAGATGAGCGACTACGAAGGCGGTGCTGCCGATGATGAGCGCGTCCTCGAGTGGGAGATGGGTCTGCCCAGGGCCGATGATCTCACTCCTCTGACTCACTCCTTGATCCCGCCGGAGCTGGCTTCCGCCTTTAGCATCTCCCTGGAGCCCGGTCGGACACTCCTCGACGTCAATCGTGCCTCGCACAATACTCTGTCCAGTATTATCGGCGGGAGTTCTCAGACCTTCTCATCCAATAATTTCAAGTCTTTCAACGAAGACCGGACTGGGGACCCGATTGTGGTGGAAGCAGATGAAGAGACCGACCGAGATGGCTCAGGGTCCGATTCTAGGAAACTAAGGAAGATCGATTGTGCAGAAGAAGCTGATTCAGCTTTACGTACAGAGAATTCGACGGAGGATCCCTCTGCGAGGACCTTGAAGCGGCCTCGGTTGGTATGGACTCCGCAGTTACACAAGCGTTTTGTCGATGTGGTGGCTCATCTAGGAATCAAGAACGCCGTGCCCAAGACAATTATGCAACTGATGAATGTTGAGGGATTGACCCGTGAAAATGTCGCCAGCCATCTGCAAAAATACCGGCTTTACCTGAAGAGGATGCAGGGGCTGTCCAACGAGGGTCCCTCGTCCTCGGATCACCTCTTCGCATCCACACCTGTGCCTCAGAGTTTACACGAGTCCGGTGGAAGTGCGCATTCGCATGGTAACGGGCATCTGCCGGTTCCGATTCCGATGCCATATCCACCGCCTATGATGCCAATGCCGGTTCTTGGCATGCCACACGGTCATGGTCACGCGCATGCTCCTATGGGAATGCCGGTGGCAAATTCGGGTGGCACAGCGGCTTATCATGGGTTCGAGTCCCATCCTTATAACATGGTGCAGCAAAGGGATTGGCCTGGCAATAAGTATGCTTCCGTTGTATCATACCCTCAAGTTGCTCCTCATGAGAAATGA 972 0.5422 MGEEVKMSDYEGGAADDERVLEWEMGLPRADDLTPLTHSLIPPELASAFSISLEPGRTLLDVNRASHNTLSSIIGGSSQTFSSNNFKSFNEDRTGDPIVVEADEETDRDGSGSDSRKLRKIDCAEEADSALRTENSTEDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQSLHESGGSAHSHGNGHLPVPIPMPYPPPMMPMPVLGMPHGHGHAHAPMGMPVANSGGTAAYHGFESHPYNMVQQRDWPGNKYASVVSYPQVAPHEK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1870 323 FunFam Two-component response regulator 143 206 - -
Glsi14g1870 323 SUPERFAMILY Homeodomain-like 144 204 IPR009057 -
Glsi14g1870 323 MobiDBLite consensus disorder prediction 92 121 - -
Glsi14g1870 323 Pfam Myb-like DNA-binding domain 151 199 IPR001005 -
Glsi14g1870 323 Gene3D - 144 206 - -
Glsi14g1870 323 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 10 306 IPR044841 GO:0003700|GO:0006355
Glsi14g1870 323 MobiDBLite consensus disorder prediction 94 121 - -
Glsi14g1870 323 MobiDBLite consensus disorder prediction 208 244 - -
Glsi14g1870 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 203 IPR017930 -
Glsi14g1870 323 NCBIfam myb-like DNA-binding domain, SHAQKYF class 148 200 IPR006447 GO:0003677
Glsi14g1870 323 MobiDBLite consensus disorder prediction 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1870 Glsi-ChrGlsi14 18881207 18882178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1870 1 274 G2-like Transcription Factor Family AT3G46640 57.285 2.35e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi14g1870 Myb_DNA-binding 1.3e-08 CL0123