Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1868 ATGTTATTTATAGGCAGCCCGAAACTAAAAGAGCTAGAAGAAGCCCAACAACCAAAGGCCCATAAAAAATGCTCCAGGTACCTGTCCAAAATAAAAACGTTGAAGTTGAAAGTGAGGAGGAAGCTGCAAATTCCAATCCAAGGATTTGCGGATAACTTGATTAACATGCATGGATTCACTCTGCCTCTAACTGCAAGCAACTTCCTTTGCTGCACACGCCTCTGTTTAAGATCTCTTCGACCTTCCCTGTTTTACCTAGCCAATTCTTCCATACCCAGTTCTAAATTTAGCTGTCGACGTGATTTCAATTCCCTTCTGTTCCATTCAGAATCCTATTTACCCTTCTGCTGGAAATATAAGAAGAATACAAGAGGTAGTATTACTCTTCTAAAAGCCATCCGTGGGGAGTCTCCTTATGAAGTTTTGGGTGTATCTCCTTCGGCAACTGTGGATGAAATCAAGAAGGCATACAGGAAACTTGCTCTCAAGTATCATCCCGATGTTAATAAAGAGGATAAGGCACAGGAGAAGTTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCTACTTCGCGTAGAAAATATGATTCTGGAAATCGTGGTACTGATTCTTCATATTATTCTTCTCAAAGAAGCCAAAGTGGGAATACACAAGAAGAAGATGAATTTTATGGATTAGGTAATTTTTTGAGAGATGTTCAAATAACACTAGAGGACTTCTTTAAAGATCTTCAAGAAGAATTCAGGAATTGGGAAGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGCTTATGGGAGGAATTGGCAGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAAGATAACTGATCCAAATAACAACTATAAAACGCCTCAGGAAGAAAATCCATCTCATGCTACTGGCCAGGGCACTCAAAATGAAGCCGGCAAAGGAGACATCAGCATTGAGGATAACCTTGATGAAATAGAAGCCACTCTTGCCCGGTTAAAGAAGGAATTAGGTTTATAG 1026 0.3957 MLFIGSPKLKELEEAQQPKAHKKCSRYLSKIKTLKLKVRRKLQIPIQGFADNLINMHGFTLPLTASNFLCCTRLCLRSLRPSLFYLANSSIPSSKFSCRRDFNSLLFHSESYLPFCWKYKKNTRGSITLLKAIRGESPYEVLGVSPSATVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSTSRRKYDSGNRGTDSSYYSSQRSQSGNTQEEDEFYGLGNFLRDVQITLEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELKITDPNNNYKTPQEENPSHATGQGTQNEAGKGDISIEDNLDEIEATLARLKKELGL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1868 341 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 94 284 - -
Glsi14g1868 341 ProSitePatterns Nt-dnaJ domain signature. 178 197 IPR018253 -
Glsi14g1868 341 MobiDBLite consensus disorder prediction 289 322 - -
Glsi14g1868 341 SUPERFAMILY Chaperone J-domain 132 197 IPR036869 -
Glsi14g1868 341 PRINTS DnaJ domain signature 139 157 IPR001623 -
Glsi14g1868 341 PRINTS DnaJ domain signature 173 193 IPR001623 -
Glsi14g1868 341 PRINTS DnaJ domain signature 157 172 IPR001623 -
Glsi14g1868 341 ProSiteProfiles dnaJ domain profile. 137 201 IPR001623 -
Glsi14g1868 341 MobiDBLite consensus disorder prediction 290 317 - -
Glsi14g1868 341 SMART dnaj_3 136 193 IPR001623 -
Glsi14g1868 341 CDD DnaJ 138 190 IPR001623 -
Glsi14g1868 341 MobiDBLite consensus disorder prediction 193 222 - -
Glsi14g1868 341 Gene3D DnaJ domain 135 258 IPR036869 -
Glsi14g1868 341 Coils Coil 318 341 - -
Glsi14g1868 341 Pfam DnaJ domain 138 198 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1868 Glsi-ChrGlsi14 18864241 18867321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1868 139 199 C2H2 Transcription Factor Family AT1G74250 41.791 1.48e-07 51.2