Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1858 ATGCTAATTAACCAGGAAAAAAAGAAAAAAAAACATCCTTCTTCTCAGTTCTCTGATTCATCTGACACTGAAATATTACTACGGAGTTGGGAGGAGTTTGGAATGGCAGAGATATGCTGCGGAGTGGTGAGCGAGAGCGACACTTCCGCTGCCTGTAAGCCCAACTCGCGTGAAGCCAGAAGGAGGAGGATGGAGATCAGGCGGTTCAAGGTGGTGGAAGGGGTGCCCCAAAAGGAGTCCCACAACGATGAGAAGCGTCCGAAACTCCACCTGGGTTCGCCGTCGCTTTCTCGAGACTGTGAGAATGCCGTCGAGAACTGTGCCACTGATATAGAAAAAGCCCTTGTTTTTCTAACGCCTGACAACGGAAAATTAGAGACCCATGAGAAACAAATTTCGGGGGTCTCCTGCAGCCCAACGCTCCCTGTGGACTCCCAAATTGTCCACATTCAGTCCCCCAAGTTTGGGGTAGCATCGGTGTGTGGAAGGCGAAGAGATATGGAGGATGCGGTGGCTATCCACCCAGGGTTTTTCCAAGACCATCCAGCCGCTGGTGAATTACATTACTTCGGAGTTTACGATGGCCACGGTTGCTCTCATGTGGCAGCCAAGTGTAAGGACCGTTTACATGAGTTGGTGAAAGAAGAGCTGCAAAGAGCCGAGTGGTCGATGGGGTGGGAGGGTCCGATGGAGCAAAGCTTCTCGCGAATGGACAAGGAGGTGATTGCCTGGAATGCTAATGTTTTGCAAGCGAATTGTAGGTGTGAGCTTCAGTCGCCGGAGTGCGATGCCGTTGGATCTACGGCGGTTGTTGCTATTTTGACAGCTGATAAGATAATCGTTGCCAACTGCGGTGATTCAAGGGCGGTGCTTTGCCGCGACGGCAAACCCATTCCCCTCTCATCCGATCACAAGCCGGATCGTCCAGACGAGCTGAACCGGATCCAGGCAGCCGGAGGGCGGGTCATTTACTGGGATGGACCTCGGGTTCTGGGAATGCTTGCCATGTCGAGAGCCATAGGTGACAACTACTTGAAGCCGTACGTGAGCTGCGTACCGGAAGTGACGATAATGGATCGGAGGGCGGAGGATGAGTGTTTGATACTTGCAAGTGACGGGTTGTGGGACGTGGTATCGAACGAGACGGCATGCGGGGTGGCGCGTATGTGTCTACGGGGGAGAAATCACGCGCCTAGGAGCTCATGGACGGAATTAGAGCGCGAGGTGGAAGGTGTGACGACCGAAATGTCTGACAAGGCGTGTTCTGACGCGTCTATGTTGCTGACGAAGCTGGCTTTGGCCAGACACTCGGCTGACAACGTCAGCGTAGTGGTGGTTGATCTGAGGAGGGTCTGA 1356 0.5339 MLINQEKKKKKHPSSQFSDSSDTEILLRSWEEFGMAEICCGVVSESDTSAACKPNSREARRRRMEIRRFKVVEGVPQKESHNDEKRPKLHLGSPSLSRDCENAVENCATDIEKALVFLTPDNGKLETHEKQISGVSCSPTLPVDSQIVHIQSPKFGVASVCGRRRDMEDAVAIHPGFFQDHPAAGELHYFGVYDGHGCSHVAAKCKDRLHELVKEELQRAEWSMGWEGPMEQSFSRMDKEVIAWNANVLQANCRCELQSPECDAVGSTAVVAILTADKIIVANCGDSRAVLCRDGKPIPLSSDHKPDRPDELNRIQAAGGRVIYWDGPRVLGMLAMSRAIGDNYLKPYVSCVPEVTIMDRRAEDECLILASDGLWDVVSNETACGVARMCLRGRNHAPRSSWTELEREVEGVTTEMSDKACSDASMLLTKLALARHSADNVSVVVVDLRRV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1858 451 ProSiteProfiles PPM-type phosphatase domain profile. 154 448 IPR001932 -
Glsi14g1858 451 MobiDBLite consensus disorder prediction 1 17 - -
Glsi14g1858 451 MobiDBLite consensus disorder prediction 73 92 - -
Glsi14g1858 451 Pfam Protein phosphatase 2C 155 408 IPR001932 -
Glsi14g1858 451 SUPERFAMILY PP2C-like 148 449 IPR036457 -
Glsi14g1858 451 PANTHER PROTEIN PHOSPHATASE 83 448 IPR015655 GO:0004722|GO:0006470
Glsi14g1858 451 Gene3D - 149 451 IPR036457 -
Glsi14g1858 451 CDD PP2Cc 154 448 IPR001932 -
Glsi14g1858 451 MobiDBLite consensus disorder prediction 1 21 - -
Glsi14g1858 451 FunFam Protein phosphatase 2C 37 149 451 - -
Glsi14g1858 451 SMART PP2C_4 146 446 IPR001932 -
Glsi14g1858 451 ProSitePatterns PPM-type phosphatase domain signature. 189 197 IPR000222 GO:0043169
Glsi14g1858 451 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1858 Glsi-ChrGlsi14 18758074 18759890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1858 146 450 PP2C-type Phosphatase Gene Family AT2G29380 68.627 2.97e-151 432