Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1854 ATGGCACAACAAGGGCAGGGCACCATGGACCCTGCCGTTCTGGATGACATTATCAACCGGCTATTGGAGTTTCGACGCGCCAAGCCTGGCAAACAGGTCCAGCTCATGGAGACCGAGATTCGTCAACTTTGCACTGTTTCCAGAGATAAATTCCTCCAACAACCCATTCTTCTCGAGCTCCAGGCACCCATCAAGATCTGCGGCGACATCCATGGACAATATTCTGACCTGTTGAGACTATTTGAATATGGGGGTCTTCCTCCAAATGCTAATTATTTATTCCTAGGAGACTATGTAGATCGTGGGAAGCAGAGTTTGGAAACAATATGCCTTATGCTTGCCTATAAGATTAAATACCCAGACAAATTCTTTATTCTAAGAGGAAATCATGAATGTGCTTCAATCAATCGTATATACGGATTCTATGATGAATGTAAACGGCGTTTCAATGTAAGACTGTGGAGGACTTTCTCTGATTGTTTTAACTGTCTTCCTGTTGCTGCGCTCATAGACAAAAAAATATTATGCATGCATGGAGGCCTTTCCCCTGATTTAACAAATTTAGATCAAATTAGAAACCTACCTCGTCCAACCGATGTTCCAGATTCTGGTTTGCTCTGTGATTTACTTTGGTCTGACCCTGGTAAAGATACGAGAGGCTGGGCAATGAATGACCGTGGAGTCTCTTACACCTTTGGTGCGGACAAGGTTTCTGAGTTCTTAATGAAGAATGACATGGATCTTATTTGTCGCGCTCATCAGGTTGTTGAGGATGGATACGAATTCTTTGCCGATCGACAGCTTGTCACTATATTCTCTGCTCCCAATTATTGTGGTGAATTTGATAATGCTGGTGCTTTGATGAGCGTTGATGAAAGATTAATATGCTCTTTCCAGATCCTGAGATAA 909 0.4279 MAQQGQGTMDPAVLDDIINRLLEFRRAKPGKQVQLMETEIRQLCTVSRDKFLQQPILLELQAPIKICGDIHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLMLAYKIKYPDKFFILRGNHECASINRIYGFYDECKRRFNVRLWRTFSDCFNCLPVAALIDKKILCMHGGLSPDLTNLDQIRNLPRPTDVPDSGLLCDLLWSDPGKDTRGWAMNDRGVSYTFGADKVSEFLMKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGALMSVDERLICSFQILR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1854 302 Gene3D - 7 302 IPR029052 -
Glsi14g1854 302 SUPERFAMILY Metallo-dependent phosphatases 21 301 IPR029052 -
Glsi14g1854 302 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Glsi14g1854 302 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Glsi14g1854 302 SMART pp2a_7 35 302 IPR006186 GO:0016787
Glsi14g1854 302 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Glsi14g1854 302 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 301 - -
Glsi14g1854 302 FunFam Serine/threonine-protein phosphatase 6 302 - -
Glsi14g1854 302 CDD MPP_PP1_PPKL 13 302 - -
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Glsi14g1854 302 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1854 Glsi-ChrGlsi14 18737206 18738282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1854 64 251 Calmodulin-binding Proteins AT5G63870 33.036 7.23e-28 107