Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1853 ATGGAAAATGAGAAAGCACCTGTCCTGGAAGCGAGGTCCATGCAGGAAATTGAGATATTAGTTGCCTCTGAGAGATTTGATGTTCTTCCTATGGCAACAGAATCATCCTGCAGTTCTATTTGTTCTTTTACCAGACAAGAACACAGTGTTCTGGCATCGAAAGAGTCCTTGAAGTCAGGAAAGAAACTTTGTGGACTCATTTTTTTCTATGCAGTGGTTATGCTTGTGGAAGTAGTTGGTGGTGTAGAAGCAAACAGCCTAGCAGTCATTAGCGATGCAGCCCACTTACTTTCTGATATTGCTGGATTCTGTATATCTCTCTTTGCAGTATGGGCTTCGGGTTGGGAGGCAACACCACTGCAGTCTTTTGGATACAATCGTCTTGAGGTTTTGGGTGCTCTTTTATCCGTGCAGTTAATTTGGCTTATATCTGGCTTCTTGATATATGAAGCAGTTGGTAGAATTCTTCTCAGAAGTGCCCGAGTGAATGGAATGCTCATGTTTGCAATTGCAGCATTTGGGTTTATTCTCAACTTTATCATGGTCGTATGGCTTGGTCATGAGCACGATCATCACCATGGCTGTGGAGACTCAGATCACGATCATGGGCTGGACGAACAACCTGACATAACTGATGAGGAAAAGCTTAATCTGGTTTCAAGTAGTCCTAGAAATTTTGATGTGTTGAACATAAATCTTCAAGGGGCCTATCTGCACGTCATGGTGGATCTGATTCAATCTCTTGGGGTGATGATTGCTGGAGGCATAATATGGGCTAAACCGGAGTGGTTAGTGGTTGACCTGATGTGTACTCTTATATTCTCTGTTATATCTTTAAGTACTACACTTTCCATGCTAAGGAATATTTATAGCATTTTGATGGAGAGAACACCAAGTGAGATCAATATCGTTAAGCTGGAAAATGGCCTCAGGTGCATCAAGGGAGTGCAGGATATTCATGACTTGCACGTTTGGCCCATAACAGTTGGGAAAATTGTTTTATCCTGCCATGTAGTAGCTGAGCCTGGCATCAGTTCTACTGATCTACTTGACAGAATTAGACATTACTGTGAAAAAACGTATAGGATACATCATGTAACCATACAAATTGAGTAA 1116 0.4176 MENEKAPVLEARSMQEIEILVASERFDVLPMATESSCSSICSFTRQEHSVLASKESLKSGKKLCGLIFFYAVVMLVEVVGGVEANSLAVISDAAHLLSDIAGFCISLFAVWASGWEATPLQSFGYNRLEVLGALLSVQLIWLISGFLIYEAVGRILLRSARVNGMLMFAIAAFGFILNFIMVVWLGHEHDHHHGCGDSDHDHGLDEQPDITDEEKLNLVSSSPRNFDVLNINLQGAYLHVMVDLIQSLGVMIAGGIIWAKPEWLVVDLMCTLIFSVISLSTTLSMLRNIYSILMERTPSEINIVKLENGLRCIKGVQDIHDLHVWPITVGKIVLSCHVVAEPGISSTDLLDRIRHYCEKTYRIHHVTIQIE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1853 371 Pfam Cation efflux family 67 294 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi14g1853 371 Gene3D Cation efflux protein transmembrane domain 60 293 IPR027469 -
Glsi14g1853 371 SUPERFAMILY Cation efflux protein transmembrane domain-like 63 295 IPR027469 -
Glsi14g1853 371 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 300 371 IPR036837 -
Glsi14g1853 371 NCBIfam cation diffusion facilitator family transporter 63 371 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Glsi14g1853 371 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 37 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1853 Glsi-ChrGlsi14 18733137 18734252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1853 1 371 Inorganic Solute Cotransporters AT2G29410 50.131 1.70e-126 367