Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1846 ATGGATCCAAACTTGGCTGAAACTCATGATTTCATAAACAGCTACAAAATGAGTGATAGCACCGTCCTCTCTGATCCAAATCAATTCCCAAGTATAGCATATGACTGGGACCTCAACCAACACTATGGGAACCTTACTAATTTCTCCAGTGACCCAATTTATCAACCTGATGTGAACCCAGTTAGTTTTCCTCCGCATACACTCGTGAACTCCGAAGAAGCGCAGCTGAATTCGTCCTGGAGTGCGAGTCCTGTAGAAGGCGTGCCGGATGTCCCATCTGCAACCATCACTTCGGTGGCGGATCCTTCCCTGGAAGACACTGACTTTTCAGAAACCATCAAATACATGAGCCAAGTTCTTATGGAAGAGAACTCGGAACAGAAGCCAAGCATGTTTTATGATCCATTGACTCTAAAAGTTACGGAGAAATCATTCTATGATGCTCTTAGAGAGGACTATCTTCTTTCCCCTATCCAACACCCGCTCGACAATGTTGAGAGCCCAGATGGTTATTTTTCTGGAAGTAGTTTTGATTCTGGCAACACCAGCACAAGCACCAACAACTCAATAGGTCTTCCTTGGCATGGGAATTCTCATGAGTTAAAGCCCTCTTCACCGGATACCCCTGTTCCTGGGTTTAATTCGCACTCCATTTCTCAGCAGCCTTCTCAACCTTCAAATGCTTTGCCTTTAACTACTATCGGCGATGGACTGCTGGATTTGGATTCTTCTATTACTAATCTCTTGGCTCAAAATATCTTTAGTGAGGCAGAATCTGTCTCGCAATTCAGGAGAGGTTTAGAGGAAGCCAGCAAATTTCTTTCTAGAGGAACTCAGCTCGTCACTGGTATGGAGAACAACACAGTGTCTCTAGATTCAAAGGGAATGGGAGAAAAGGCAGTAGTCAATATGGAGAAAGATGTTGGGGAGAATTTGCAGGGGTTAAAGGGTAGAAAGAACTATGAGCGTGAAGGTAGAGATGAAGAAGAAGGGAGATGTAACAAGCAGTCAGCAGTGTATGTTGATGAGAGTGAAATATCGGAAATGTTTGATCGAGTGTTGCTTAGTGTTGAGAAAGTTCCATTATGTGCTGAGCAGGAAGGCTTGCCGTGTGAATCAGTGAAAGCCATGCAGCCAATTGAACAGAAGCATTCGTCTGATGGAGGGAAGACTGCCTCTAAGAAACAAGTCAGGAAGAAGGAAACGGTTGATTTGAGGACTCTTCTGGTCCTATGTGCACAAGCTGTGTCTGCCAATGATAGCAGGAATGCTAATGAATTACTAAAGCAGATTAGGCAGCATTCTTCTCCCTCCGGTGATGCATCACAGAGGTTGGCTCATTACTTCGCCAATGGTCTTGAGGCACGTTTGGTTGGCGCTGGTGTTGGAACCCCAATATATTACACCTCTCTGCACTCTAAGCGGGTATCTGCTGCTGATTTTTTGAAGGCTTACCAAGTTCATTTTTCTGCCTCACCTTTCAAGAAGTTTGCACATTTATTTGCAAATAAAATGATTATGAAAGCAGCTGAGAAGGCAGAAACGCTTCATATTATTGATTTTGGTATTCGATATGGTTTCCAGTGGCCAATACTTATCAAGTTTCTGTCAAATAGAACCGGTGGGCCTCCTAGGCTACGCATCACCGGGATAGAATTTCCCCAGGCTGGCTTTCGTCCTGCAGAAAGAATAGAGGAAACTGGTCGTCGTCTAGCTAATTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAAAGCCATAGCGTCACAAAACTGGGAAACCATCCGAATTGAAGACCTTAAGATTGAGAGCAATGAGCTGCTTGCTGTGAACTGTCTGATGAGGTTTAAGAATTTACTTGACGAGACAATTGAAGAGAACAGTCCTAGGAATGCAGTTCTGAATCTAATAAGGAGGATGAATCCTAATATTTTTGTTCAGTCCATTGTTAATGGATCCTACAATGCACCTTTCTTTCTCACACGGTTCAGGGAGGCGCTGTTCCATTTTTCAGCACTGTACGATATGCTTGATACATTCATACCCCGTGACAACGAATGGAGGTTGATGCTTGAGAAAGAGTTTTCTGGTCGAGAGGCTATGAATGTTGTAGCATGCGAAGGTTTAGAGAGGGTTGAGAGGCCTGAAACATACAAACAATGGCAGGGAAGGATTACAAGGGCTGGATTCAGGCAGCTCCCACTGAATAAGGAGCTAATGGCCAAATTGAGGGGAAAGTTGGAGACATGCTACCACGGAGATTTTTTGTTTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGACGCATTTTGCATGCTTCAACTTGTTGGGTACCAGCATAA 2349 0.441 MDPNLAETHDFINSYKMSDSTVLSDPNQFPSIAYDWDLNQHYGNLTNFSSDPIYQPDVNPVSFPPHTLVNSEEAQLNSSWSASPVEGVPDVPSATITSVADPSLEDTDFSETIKYMSQVLMEENSEQKPSMFYDPLTLKVTEKSFYDALREDYLLSPIQHPLDNVESPDGYFSGSSFDSGNTSTSTNNSIGLPWHGNSHELKPSSPDTPVPGFNSHSISQQPSQPSNALPLTTIGDGLLDLDSSITNLLAQNIFSEAESVSQFRRGLEEASKFLSRGTQLVTGMENNTVSLDSKGMGEKAVVNMEKDVGENLQGLKGRKNYEREGRDEEEGRCNKQSAVYVDESEISEMFDRVLLSVEKVPLCAEQEGLPCESVKAMQPIEQKHSSDGGKTASKKQVRKKETVDLRTLLVLCAQAVSANDSRNANELLKQIRQHSSPSGDASQRLAHYFANGLEARLVGAGVGTPIYYTSLHSKRVSAADFLKAYQVHFSASPFKKFAHLFANKMIMKAAEKAETLHIIDFGIRYGFQWPILIKFLSNRTGGPPRLRITGIEFPQAGFRPAERIEETGRRLANYCKRFNVPFEYKAIASQNWETIRIEDLKIESNELLAVNCLMRFKNLLDETIEENSPRNAVLNLIRRMNPNIFVQSIVNGSYNAPFFLTRFREALFHFSALYDMLDTFIPRDNEWRLMLEKEFSGREAMNVVACEGLERVERPETYKQWQGRITRAGFRQLPLNKELMAKLRGKLETCYHGDFLFDEDNNWMLQGWKGRILHASTCWVPA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1846 782 Pfam GRAS domain family 405 779 IPR005202 -
Glsi14g1846 782 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 345 773 IPR005202 -
Glsi14g1846 782 MobiDBLite consensus disorder prediction 166 231 - -
Glsi14g1846 782 MobiDBLite consensus disorder prediction 169 194 - -
Glsi14g1846 782 MobiDBLite consensus disorder prediction 378 398 - -
Glsi14g1846 782 MobiDBLite consensus disorder prediction 201 231 - -
Glsi14g1846 782 ProSiteProfiles GRAS family profile. 396 780 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1846 Glsi-ChrGlsi14 18690575 18692923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1846 112 782 GRAS Transcription Factor Family AT1G07530 53.017 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi14g1846 GRAS 1.9e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1846 14 18690575 18692923 Glsi04g0179 04 1207020 1209601 CCT
Glsi04g0178 04 1201649 1203994 Glsi14g1846 14 18690575 18692923 CCT