Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1838 ATGGTCTTCTTTGTGTGGGCAAAAATAGTGCAATTATCCCAACATTTGGTGGGTAAATTATGCGGAACTTGTATAATTTTTATTTTCTTTATATCTATTGATGGCCACAATGATCTAAAGATGAGGTTTGACAGAAAAAGTTGGTCTGGTGTCATTAATGTGAATGATGGGAGTGGAGGAAGATTGGTTAGGCAAAGCATACACCAGATCATACGTCACAAAAAAGTTGCCTTTCTTTTTCCCTTGAGATATGCAAGACAGCACAGTCACTGGTATTTCCTGGTAGAGCATTTTCATTCCCTCATGGAAGTTGAGGACTGCAATCGCAAAGGTAAGAAAGTTGAAGGAATTATTGTTGCTTCTGGCATGGGTATTTGTTTGAGCGCCCAAATTAAAGCTGAGAGCCCATGCAACACAGGGTTAAATTCAAAATATGTAAGCACAGACGGAAATGATAGCAGCACAAGTAGTAAGGTCTCAGCAGTCTCTGTGCCTCAGACTCCTAGGAGTGAAGGCGAGATCTTGCATTCATCCAATGTAAAGAGCTTTACTTTGGCAGAGCTGAAAATGGCCACCAGAAATTTCCGTCCAGATAGTGTGTTAGGAGAAGGTGGTTTTGGATCAGTTTATAAGGGGTGGATTGACGAGAATTCCTCGATTGCTACCAAACCTGGCACTGGCATTGTTATCGCTGTCAAAAGACTTAATCAAGATGGTTTGCAAGGTCACAAGGAGTGGTTGGCCGAAGTGAACTATCTCGGACAGCTTTCTCATCCAAATCTTGTGAAATTAATTGGGTACTGCCTGGAAGATGAACACCGGCTTTTGGTCTATGAATTTATGCCTCGAGGCAGCTTGGAGAATCATTTGTTCAGAAGAGGCTCATATTTTCAACCTCTTTCTTGGAGCATCCGAATGAAGGTTGCTCTTGGTGCTGCCAGAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATACAGGGATTTTAAGACTTCAAATGTGTTGCTGGATTCAAAATATAACGCAAAACTCTCTGATTTTGGGCTGGCCAAGGATGGACCAACAGGGGACAAAAGTCACGTCTCCACCAGGGTAATGGGAACCTATGGATATGCAGCTCCTGAATATCTGGCCACTGGTCACCTAACTACCAAGAGTGACGTGTATAGTTTTGGGGTAGTGCTGCTCGAATTGTTATCCGGGCGGCGAGCAGTTGATAAGAATCGACCATCTGGTCAGCACAATTTGGTGGAGTGGGCTAAGCCCCATCTGCCAAACAAACGAAAGATTTTTCGCGTGCTGGATGGCCGTCTTGAAGGTCAGTATTCAGTAGAGGAGGCCTACAAGGCAGCTACCCTTGCTTTGCGATGCCTAGCCATGGAGACCAAGATGAGGCCAAACATGGATGACGTTGTTACAGCTTTGGAGCAGCTCCAAGTTCCCAATAATGTAAATCCAAGCCATCAAAACCCTTGTGTTAATAATCGCTGCCGTGCTCGTAGAAGAAGTGCTGATGATGCTAGATGTGGGAGGGCCACCGCTGCTTATCCCCGCCCCTCTGCTTCGCCTCTCTATGCTTGA 1587 0.448 MVFFVWAKIVQLSQHLVGKLCGTCIIFIFFISIDGHNDLKMRFDRKSWSGVINVNDGSGGRLVRQSIHQIIRHKKVAFLFPLRYARQHSHWYFLVEHFHSLMEVEDCNRKGKKVEGIIVASGMGICLSAQIKAESPCNTGLNSKYVSTDGNDSSTSSKVSAVSVPQTPRSEGEILHSSNVKSFTLAELKMATRNFRPDSVLGEGGFGSVYKGWIDENSSIATKPGTGIVIAVKRLNQDGLQGHKEWLAEVNYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSIRMKVALGAARGLAFLHSAETKVIYRDFKTSNVLLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGQHNLVEWAKPHLPNKRKIFRVLDGRLEGQYSVEEAYKAATLALRCLAMETKMRPNMDDVVTALEQLQVPNNVNPSHQNPCVNNRCRARRRSADDARCGRATAAYPRPSASPLYA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1838 528 SUPERFAMILY Protein kinase-like (PK-like) 169 477 IPR011009 -
Glsi14g1838 528 ProSitePatterns Protein kinases ATP-binding region signature. 201 233 IPR017441 GO:0005524
Glsi14g1838 528 FunFam Probable serine/threonine-protein kinase PBL8 281 497 - -
Glsi14g1838 528 PANTHER OS01G0588500 PROTEIN-RELATED 157 481 - -
Glsi14g1838 528 FunFam Serine/threonine-protein kinase BIK1 162 280 - -
Glsi14g1838 528 ProSiteProfiles Protein kinase domain profile. 195 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1838 528 Gene3D Transferase(Phosphotransferase) domain 1 281 501 - -
Glsi14g1838 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Glsi14g1838 528 Gene3D Phosphorylase Kinase; domain 1 170 280 - -
Glsi14g1838 528 Pfam Protein tyrosine and serine/threonine kinase 199 476 IPR001245 GO:0004672|GO:0006468
Glsi14g1838 528 CDD STKc_IRAK 201 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1838 Glsi-ChrGlsi14 18632113 18636514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1838 142 524 Glycoside Hydrolase AT3G07070 44.975 6.69e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi14g1838 PK_Tyr_Ser-Thr 1.8e-45 CL0016