Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1834 ATGGGTAACGGTTTAGGCAAGCTAACTGTGTGTTTCACCGGCAACGGAGGCCGTCGCCGGAATCAGGATATATCAATTTTAATAACCGACCCCCTCGACGAAGGGCTCGGCCACTCTTTCTGCTACGTTCGACCTGACCCGTCTCGTCTATCTTCGTCCAAAGTCCACTCCGAGGAGACCACCACCTTCCGAACAATTTCAGGTGCATCTGTCAGTGCTAACACCTCAACCCCGCTTTCCACAGCCTTCGTTGACTTGTACTCCTACGGCTGTATTGATAGAGCTGCAGCTTTTGAGAGTTCAACTTCTTTTGCTTCCCTTCCTCTGCAACCAATCCCAAGAAATCTCATGAATTCCGGTCCCTTTTCGGGAAATCTCGGTTTAATTCCGGGGTCCTGTCCCCTTGAAAGAGGTTTCTTATCGGGTCCAATAGAGCGTGGATTTATGTCGGGTCCTATAGATCGTGGGTTGTTCTCTGGACCGATGGAAAAGGGAAGTTCCGATCAATTTCAGAGAAGCTTTTCTCATGGGGATTTCGCGTTTAGACCCAGAACGCGGAAGGGCCGATGGATTCAAGTTCTTCGGAGGGCCATATCCAAGACCTTATCTCGGGGACAGAATTCGATTGTTGCTCCGATTAAAGGGATTGCCACGATGAAAGAACCGGAATGGATTATTGGACCGGAGAAGCACAACGAGAATTTGACTGTCAGTAGTGTGAATTTCAGTAGCGATGGTAGTCTGGAAGATGATGAGTCTATGGAAAGTCAAAATCTTCAATGGGCTCAAGGGAAAGCGGGTGAGGACAGAGTTCATGTGGTGGTATCAGAGGAACACGGTTGGGTTTTCGTAGGGATTTACGATGGTTTCAATGGTCCGGATGCTCCCGATTACCTTCTATCAAACTTGTACGGTGCCGTGCATAAAGAATTGAAGGGATTATTATGGGATGATGGGTTTGAAGCCGCCGCCGCTGCCGCCCCTGAGACCTCCGCCCGTCAGCCAGAGAATTCTAATTTGGAAGTGGAAGACTCGTTACCGATCAGTGACAGTGACGTTGGGGGAAAGGATAGGTTGGTAGATGCTTGTTCTCACTGTGTAGAGCGAGAGAATCCGTGCGCAAGTGGGAATGCGAACGTTGATCCGATCTTTAAGAAAAAGCGAGGTAAGAATTCTAAGAGCAAGTATAAAGGGGCAGCGAAGAAATGGGAGGAGAATCAGATAAGGTGGAAGTGTGAATGGGATCGCGAAAGAGTAGAGCTTGATAGAAGATTAAAGGAACAACTAAATCGATCTGGTTCTGCAGGTACAAACCCAATTAATCATTCAGATGTATTGGAAGCTCTTTCGCAAGCTCTGATAAAAACAGAGGAGTCTTATTTGGATATTGCAGATAAGATGGTCATGGAAAATCCTGAACTAGCTTTAATGGGTTCATGTGTCCTTGTAATGTTAATGAAGGGAGAGGATCTTTATGTGATGAATGTAGGTGATAGTAGAGCTGTACTAGCTCAGAAGGCGGAGCCTGATTATTGGCTTGGGAAAATTCGGCAGGACTTGGAGAGGATCAATGAAGAAACAATGCATGATCTTGAATCATTGGACAGTGATAGAACAAACTTGGTTCCCAGTCTAAGTGCGTTTCAGCTAACCAAGGATCACAGTACCAATGTTGAGGAAGAAGTCCAGAGAATAAAAAAAGAACACCCAGATGATGCTTGTGCAGTGGTAAATGATCGTGTCAAGGGTTCTCTGAAGGTTACCCGAGCATTCGGTGCCGGATTTCTCAAACAGCCTAAGTGGAACGATGCACTTCTGGAGATGTTCAGAATAGAGTATGTAGGAACTTCTCCTTATATCACGTGTCTACCATATCGAAAGCATCACAGGCTAGGACCAAAGGACAAATTTTTGATTTTATCCTCCGATGGGCTCTACCAATACTTGACAAACGAAGAAGCAGTGGCTGAAGTGGAGCTTTTCATCACGTTGCAACCTGAGGGAGACCCTGCTCAACATTTGGTTGAAGAAGTGCTATTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTCCACGAGTTGCTGGAAATTCCACAGGGTGATAGGCGTCGTTACCATGATGATGTTTCTGTCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCCTGTGTATAA 2175 0.4607 MGNGLGKLTVCFTGNGGRRRNQDISILITDPLDEGLGHSFCYVRPDPSRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMNSGPFSGNLGLIPGSCPLERGFLSGPIERGFMSGPIDRGLFSGPMEKGSSDQFQRSFSHGDFAFRPRTRKGRWIQVLRRAISKTLSRGQNSIVAPIKGIATMKEPEWIIGPEKHNENLTVSSVNFSSDGSLEDDESMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYGAVHKELKGLLWDDGFEAAAAAAPETSARQPENSNLEVEDSLPISDSDVGGKDRLVDACSHCVERENPCASGNANVDPIFKKKRGKNSKSKYKGAAKKWEENQIRWKCEWDRERVELDRRLKEQLNRSGSAGTNPINHSDVLEALSQALIKTEESYLDIADKMVMENPELALMGSCVLVMLMKGEDLYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMHDLESLDSDRTNLVPSLSAFQLTKDHSTNVEEEVQRIKKEHPDDACAVVNDRVKGSLKVTRAFGAGFLKQPKWNDALLEMFRIEYVGTSPYITCLPYRKHHRLGPKDKFLILSSDGLYQYLTNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSVIVISLEGRIWRSCV 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1834 724 CDD PP2Cc 421 715 IPR001932 -
Glsi14g1834 724 MobiDBLite consensus disorder prediction 326 348 - -
Glsi14g1834 724 MobiDBLite consensus disorder prediction 331 345 - -
Glsi14g1834 724 Pfam Protein phosphatase 2C 444 671 IPR001932 -
Glsi14g1834 724 Coils Coil 517 537 - -
Glsi14g1834 724 SMART PP2C_4 252 713 IPR001932 -
Glsi14g1834 724 PANTHER PROTEIN PHOSPHATASE 2C 249 714 IPR015655 GO:0004722|GO:0006470
Glsi14g1834 724 SUPERFAMILY PP2C-like 265 716 IPR036457 -
Glsi14g1834 724 Gene3D - 227 720 IPR036457 -
Glsi14g1834 724 ProSiteProfiles PPM-type phosphatase domain profile. 251 715 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1834 Glsi-ChrGlsi14 18570114 18572922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1834 1 724 PP2C-type Phosphatase Gene Family AT1G07630 67.300 0.0 943