Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1826 ATGCATATGGTTGTACATGTGCATTCGGGTTCAGATGCAAAGCGTCTGATTGGAAGGAGATTCAGCGAAGCCTCTGTCCAGAGTGACATGAAGTTATGGCCTTTCAAAATCATTCCTGGAGCTGGAGACAAACCCACGATTGTGGTAAATTATAAAGGTGAAGATAAGCAATTCGCTCCTGAGGAGATATCTTCCATGGTTCTGATGAAGATGCGTGAGATTGCAGAGGCTTATCTTGGTTCCAATGTCAAGAACGCCGTAGTTACGGTACCTGCTTACTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCTGGGGTAATTGCTGGTCTCAATGTTATGCGTATTATTAACGAGCCAACAGCTGCTGCAATTGCTTATGGTCTTGACAAGAAAGCCACAAACGTGGGAGAGAAGAATGTACTTATATTTGATCTTGGTGGTGGCACCTTTGATGTTTCGCTTCTCACTATTGAAGAGGGTATCTTTGAGGTCAAAGCCACAGCTGGAGATACTCATTTAGGAGGAGAAGATTTTGACAACAGAATGGTGAACCATTTTGTTCAGGACTTCAAGAGGAAGAATAAGAAGGACATCAGTGGGAACCCCAGAGCCCTCAGGAGACTGAGGACATCGTGTGAGCGAGCAAAACGTACTCTCTCCTCCACTGCTCAGACCACTATTGAAATTGATTCTTTATTTGAGGGCATTGATTTCTATTCCACCATAACCAGGGCGAGATTTGAGGAGTTGAATATGGACCTCTTCAGGAAATGTGTGGATCCTGTAGAGAAATGCTTGAGGGATGCCAAAATGGACAAAAGCTCCGTGCATGAGGTTGTTCTTGTAGGTGGCTCAACCAGGATTCCCAAGGTACAGCAGCTTTTGCAGGACTTTTTCAACGGGAAGGAACTCTGCAAGAGTATCAACCCTGACGAGGCTGTTGCTTATGGAGCTGCAGTACAAGCTGCCATTTTGAGCGGTGAGGGTAATGAGAAGGTGCAGGACTTGCTATTACTGGATGTTACACCGCTATCACTTGGGCTGGAAACTGCTGGAGGAGTCATGACTGTGCTCATTCAAAGGAACACAACAATTCCTACCAAGAAAGAACAAGTATTCTCTACATACTCGGATAACCAACCTGGTGTGTTAATTCAGGTTTACGAGGGTGAGAGAACAAGGACAAGAGACAATAACTTGTTGGGTAAATTTGAGCTGTCGGGCATTCCTCCAGCTCCAAGGGGAGTTCCTCAGATCACTGTCTGCTTTGACATTGATGCAAATGGTATTTTGAATGTCTCTGCGGAGGACAAAACTACTGGGCAGAAAAATAAGATTACTATTACGAATGACAAAGGCAGACTTTCAAAGGAGGAAATTGAGAAGATGGTGCAGGAAGCAGAGAAATACAAGTCAGAGGATGAGGACCACAAGAAGAAAGTCGAGGCAAAGAATGCGCTGGAAAATTATGCCTACAATATGAGGAATACGGTGAGGGATGAAAAGATTGGGTCGAACCTCAATCCAGCTGATAAGAAGAAAATTGAAGACGCTGTGGAAGAGTCCATTCAATGGCTGGACAGCAACCAGCTTGCAGAATGTGACGAATTCGAAGATAAGATGAAAGAACTCGAGGGACTCTGCAATCCCATAATCGCTAAAATGTACCAGGGACAGGGAGCAGGTGCGGATTTGGGGGGTGGTGCTATGCGCGGTGATGCTCCTCCAGCTGGTGGAAGTGGAGCTGGACCCAAGATTGAGGAGGTTGATTAA 1776 0.4561 MHMVVHVHSGSDAKRLIGRRFSEASVQSDMKLWPFKIIPGAGDKPTIVVNYKGEDKQFAPEEISSMVLMKMREIAEAYLGSNVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATNVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQDFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCVDPVEKCLRDAKMDKSSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEDHKKKVEAKNALENYAYNMRNTVRDEKIGSNLNPADKKKIEDAVEESIQWLDSNQLAECDEFEDKMKELEGLCNPIIAKMYQGQGAGADLGGGAMRGDAPPAGGSGAGPKIEEVD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1826 591 MobiDBLite consensus disorder prediction 563 591 - -
Glsi14g1826 591 FunFam Heat shock 70 kDa protein 479 591 - -
Glsi14g1826 591 FunFam Heat shock 70 kDa 175 258 - -
Glsi14g1826 591 PANTHER HEAT SHOCK PROTEIN 70KDA 11 523 IPR013126 GO:0005524|GO:0140662
Glsi14g1826 591 Gene3D - 132 306 - -
Glsi14g1826 591 Gene3D - 67 324 - -
Glsi14g1826 591 Pfam Hsp70 protein 12 558 IPR013126 GO:0005524|GO:0140662
Glsi14g1826 591 SUPERFAMILY Actin-like ATPase domain 11 131 IPR043129 -
Glsi14g1826 591 SUPERFAMILY Actin-like ATPase domain 138 328 IPR043129 -
Glsi14g1826 591 ProSitePatterns Heat shock hsp70 proteins family signature 3. 280 294 IPR018181 -
Glsi14g1826 591 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 483 563 IPR029048 -
Glsi14g1826 591 Coils Coil 461 481 - -
Glsi14g1826 591 FunFam Heat shock 70 kDa protein 138 201 - -
Glsi14g1826 591 PRINTS 70kDa heat shock protein signature 277 293 - -
Glsi14g1826 591 PRINTS 70kDa heat shock protein signature 336 355 - -
Glsi14g1826 591 PRINTS 70kDa heat shock protein signature 149 159 - -
Glsi14g1826 591 PRINTS 70kDa heat shock protein signature 86 106 - -
Glsi14g1826 591 PRINTS 70kDa heat shock protein signature 417 433 - -
Glsi14g1826 591 PRINTS 70kDa heat shock protein signature 309 329 - -
Glsi14g1826 591 FunFam heat shock 70 kDa protein-like 45 137 - -
Glsi14g1826 591 ProSitePatterns Heat shock hsp70 proteins family signature 2. 143 156 IPR018181 -
Glsi14g1826 591 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 331 484 IPR029047 -
Glsi14g1826 591 Gene3D - 485 559 IPR029048 -
Glsi14g1826 591 FunFam Heat shock 70 kDa 331 485 - -
Glsi14g1826 591 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 332 489 IPR029047 -
Glsi14g1826 591 Gene3D - 11 66 - -
Glsi14g1826 591 Gene3D Actin; Chain A, domain 4 175 258 - -
Glsi14g1826 591 FunFam heat shock 70 kDa protein-like 11 66 - -
Glsi14g1826 591 FunFam Heat shock cognate 70 kDa protein 2 259 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1826 Glsi-ChrGlsi14 18493088 18494863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1826 12 591 Calmodulin-binding Proteins AT3G12580 88.812 0.0 1048