Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1824 ATGGAGAGTCATACCCTGGAGATGGCAGGGTCTAGCGCAACACCAGCAAGTTCGCGATGGAACCCTACAAAAGAGCAAATAAACATGTTGGAGAATCTGTATAAGCAGGGGATAAGGACGCCCAGTGCTGAGCAAATTCGGCAGATTACTGCTAGGCTCAGGGCGTATAGTGACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAATCCAGGCAGAGACTGAAGCAGAAGCAAGAAATGCCACAGAGGGAACTGGGCTTTTATCCTCAATATTCAATGGTGATTCTAACTGGAGGTCTTAGGGAGAGCCCAATCACTGAGAAAGTTGTGCCAAAAAACTGTGATGGCCTGCAGGTAAACGAACACACGCAACAGCGAATCCCAGAAAACTTCAGCAAAAGTAACCAAGGGACGCTGACTCTCTTTCCTCTTCACCCAACTGGCATCCTGGAAGGCAAAACAATGAAGCAGGCGTCTAATTCTCTGTCTTCACTTTCTGCTGATACTCCCGCTACTTCTGAGTCTTCTGATATTGACGAAGAAGATGATCGCCCTGAAACCCAATCCTTTGATTTCTTTTCTCTAGAACTAGGATTCCGAGAGAGTGACTAA 621 0.4622 MESHTLEMAGSSATPASSRWNPTKEQINMLENLYKQGIRTPSAEQIRQITARLRAYSDIEGKNVFYWFQNHKSRQRLKQKQEMPQRELGFYPQYSMVILTGGLRESPITEKVVPKNCDGLQVNEHTQQRIPENFSKSNQGTLTLFPLHPTGILEGKTMKQASNSLSSLSADTPATSESSDIDEEDDRPETQSFDFFSLELGFRESD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1824 206 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Glsi14g1824 206 MobiDBLite consensus disorder prediction 162 176 - -
Glsi14g1824 206 CDD homeodomain 19 79 IPR001356 GO:0003677
Glsi14g1824 206 MobiDBLite consensus disorder prediction 1 22 - -
Glsi14g1824 206 SUPERFAMILY Homeodomain-like 17 83 IPR009057 -
Glsi14g1824 206 Gene3D - 9 77 - -
Glsi14g1824 206 MobiDBLite consensus disorder prediction 162 206 - -
Glsi14g1824 206 Pfam Homeodomain 17 76 IPR001356 GO:0003677
Glsi14g1824 206 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 85 IPR044555 GO:0003700|GO:0099402
Glsi14g1824 206 SMART HOX_1 15 82 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1824 Glsi-ChrGlsi14 18487542 18488350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1824 6 82 Wox Gene Family AT5G59340 74.026 2.33e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi14g1824 Homeodomain 1.7e-17 CL0123