Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1821 ATGGCGAACACACTAATTTCGTCTCCTTCATTTATCGGCAAGCCACTCCCTTTATTATCTCGCCATGGTCTGCGCACCTTCCCTCACCGTGGGCTAGTCACCACCAGGGTTAAGTTCTGCTTCCACGAAATTCTCCCAACTCAATCTATTATTTATTCCTTTGACTTCAACCATGTTGTTACTAGAGCTGAAGGCCTTCTTTACACGCTTGCTGACGCAACAATTGCAGCGGATTCAGGTGCTGTTTCTGCTGCGTCCAGCTCCACAGATGTTGTGCACAAGAACGGAGGGTGGTTTGGTTTTATATCCGAAGGAATGGAATTTGTTCTCAAGGTGTTAAGGGATGGCCTTAACGCTGTGCATGTGCCTTACTCATACGGATTTGCCATAATATTGCTCACTGTTATTGTTAAAGTTGCTACGCTTCCCTTGACAAAGCAACAGGTCGAATCAACACTTGCTATGCAAAATCTTCAACCAAAGATTAAGGCAATTCAAGAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACCTCAAGGCTATATAGGCAGACTGGGGTTAACCCATTGGCAGGTTGTTTCCCAACTTTGGCTACAATTCCAGTCTGGATAGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTATTAACAGAAGGTTTCTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCTGCTCGACAAAGTGGATCTGGAATTTCTTGGCTTTTCCCATTTGTGGATGGCCATCCGCCCTTGGGTTGGCATGACACTACAGCGTATCTCATTTTGCCTATCCTTCTTGTTGTTTCTCAATATGTTTCAATGGAAATCATGAAACCTCCTCAGACCAACGATCCATCTCAAAAGAATACACTTCTAATTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCGCTGTCTGTCCCATCAGGATTAACAATTTACTGGTTTACAAACAATGTCCTGAGCACAGCACAACAACTATGGTTGCGCAAATTAGGAGGTGCCAAGCCTGTTGTGAATGAAAATGCAAGCGAAATTATTACTGCAGGACGTGCTAAACGGTCAGCATCTCAGCCAGCAAGAGCTGGTGAAAGGTTTAAGCAGTTTAAAGAAGAGGAGAAGAAGTTAAGCAAGGCTCTGTCAGTGGAAGAGGTTCAGCCTCTGGCTTCTGCTTCTGGTTCAGACAAAGAAAGTAAAGACAAGGGTCAGGAAGTTGCAGAAGCAGCATCTGCTTCTACAGTTAGCAAAGAGGGTCCGAGTTATTCTAGGCAAAAAAGAAACAAGCGCTCAAAGCGGAAAAGAGCTGTATAA 1338 0.4402 MANTLISSPSFIGKPLPLLSRHGLRTFPHRGLVTTRVKFCFHEILPTQSIIYSFDFNHVVTRAEGLLYTLADATIAADSGAVSAASSSTDVVHKNGGWFGFISEGMEFVLKVLRDGLNAVHVPYSYGFAIILLTVIVKVATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQTGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWHDTTAYLILPILLVVSQYVSMEIMKPPQTNDPSQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQLWLRKLGGAKPVVNENASEIITAGRAKRSASQPARAGERFKQFKEEEKKLSKALSVEEVQPLASASGSDKESKDKGQEVAEAASASTVSKEGPSYSRQKRNKRSKRKRAV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1821 445 PANTHER OXA1 76 383 IPR001708 GO:0016020|GO:0032977
Glsi14g1821 445 Pfam 60Kd inner membrane protein 126 340 IPR028055 -
Glsi14g1821 445 CDD 5TM_YidC_Alb3 127 340 IPR047196 -
Glsi14g1821 445 MobiDBLite consensus disorder prediction 386 445 - -
Glsi14g1821 445 NCBIfam membrane protein insertase YidC 125 339 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1821 Glsi-ChrGlsi14 18465941 18470125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1821 34 393 Chloroplast and Mitochondria Gene Families AT2G28800 67.778 7.95e-179 505