Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1804 ATGACAACAGCACCGCCTCAGGAAAGAAAACCCTATAATTCAGCTTATCTCTTGCTATTTGCTACCATTAATTTGGACCGTGGGAATTGGATACTGCCCGAGTTGAGTTGGATTGTATTTTGAGTTGCGTTCTGGAAGAAAGTTGAGATGGTCCAAAGAATCGGCACCAGGCTCTTCATCAGCAGATTATCATCGTACACAACCAATGAGCACCTCAAGAGCTTGTTTTCTCCCTTTGGAATTGTCACTGAAGCTAGTCTTGTAAAGGACCCAAAAACTCAAAGACCCAAAGGGTTCGGCTTCGTCTCGTACGAGTCAGAAATTGAAGCGGAGAAGGCTATGAAGGCCATGAATGGCAGGATAGTTGATGGAAGGCTGATTTTTGTTGAAGGTGCGAAAGCTAAAAGACCTGGAGAAGATGGTGCCTCTTGA 432 0.4468 MTTAPPQERKPYNSAYLLLFATINLDRGNWILPELSWIVFXVAFWKKVEMVQRIGTRLFISRLSSYTTNEHLKSLFSPFGIVTEASLVKDPKTQRPKGFGFVSYESEIEAEKAMKAMNGRIVDGRLIFVEGAKAKRPGEDGAS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1804 143 SUPERFAMILY RNA-binding domain, RBD 55 138 IPR035979 GO:0003676
Glsi14g1804 143 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 51 137 - -
Glsi14g1804 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 127 IPR000504 GO:0003723
Glsi14g1804 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 56 134 IPR000504 GO:0003723
Glsi14g1804 143 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 57 135 - -
Glsi14g1804 143 SMART rrm1_1 57 130 IPR000504 GO:0003723
Glsi14g1804 143 Gene3D - 46 143 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1804 Glsi-ChrGlsi14 18342914 18345493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1804 56 139 Eukaryotic Initiation Factors Gene Family AT2G23350 30.952 5.23e-09 51.6