Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1797 ATGAAAATGGTTCAACAGCAATTCCGAAGAGGTCCGTGGACAGAACAGGAGGACTTCAAATTGGTCTCCTTTGTTGGCTTGTTTGGAGACCGGAGGTGGGATTTTATAGCCAAAGTTTCAGGTTTGAAGGTGGCGGGAGACAGTAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAACTACCTGCATCCTGGTCTCAAACGGGGCAAGATGACACCCCAAGAAGAGCGCCTCGTGCTGGAGCTTCACTCAAAATGGGGAAATAGATGGTCCAGGATTGCTCGGAAATTACCAGGGCGCACAGACAATGAGATTAAGAACTACTGGAGGACTTACATGAGGAAGAAGGCCCAGGAGAAAAAGCAGGCAGCCACTCCATCACAAACATCTAGTTGTCATTCCTCATTATCATCAAATAACCATACTGTGGATTCATATCCTTCCAAAGATACTGGAGAAGAAAGCTTTTATGATACAGGAGGTCCTACTATGATCGACTCAACAGCAATAAGGATTGGCGAAGAACAAGAAGGTGAAAAGGGGTACTCTATGGATGACATATGGAAAGATATTGCCCTGTCAGAAGAAAACATTCTGCAGCCAGTTGGGAATATTGAAGAGGGCTGCAACTTCTCTTGTCCTCATATGCCATCTCCTTCGTGGGAGCATTCTTCAGACTTGCTATGGGTGATAGATGAAGAAGAAAGTAAGATGTTTCTCCCTGCGGGCGATCAATTTTTTTCCTGTTATGAACAAGGGAGAGCATTTCTAACTGGCTAA 783 0.4496 MKMVQQQFRRGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLKVAGDSNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQEKKQAATPSQTSSCHSSLSSNNHTVDSYPSKDTGEESFYDTGGPTMIDSTAIRIGEEQEGEKGYSMDDIWKDIALSEENILQPVGNIEEGCNFSCPHMPSPSWEHSSDLLWVIDEEESKMFLPAGDQFFSCYEQGRAFLTG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1797 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 140 IPR044676 GO:0003700|GO:0006355|GO:0043565
Glsi14g1797 260 MobiDBLite consensus disorder prediction 123 147 - -
Glsi14g1797 260 Gene3D - 71 142 - -
Glsi14g1797 260 SUPERFAMILY Homeodomain-like 8 110 IPR009057 -
Glsi14g1797 260 SMART sant 68 116 IPR001005 -
Glsi14g1797 260 SMART sant 9 65 IPR001005 -
Glsi14g1797 260 FunFam MYB transcription factor 71 137 - -
Glsi14g1797 260 MobiDBLite consensus disorder prediction 117 165 - -
Glsi14g1797 260 CDD SANT 12 63 IPR001005 -
Glsi14g1797 260 CDD SANT 71 114 IPR001005 -
Glsi14g1797 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Glsi14g1797 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 63 IPR017930 -
Glsi14g1797 260 Gene3D - 10 68 - -
Glsi14g1797 260 FunFam Myb transcription factor 10 68 - -
Glsi14g1797 260 ProSiteProfiles Myb-like domain profile. 5 63 IPR001005 -
Glsi14g1797 260 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Glsi14g1797 260 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Glsi14g1797 260 Pfam Myb-like DNA-binding domain 10 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1797 Glsi-ChrGlsi14 18293429 18294427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1797 1 258 MYB Transcription Factor Family AT5G59780 57.252 1.12e-91 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi14g1797 Myb_DNA-binding 5.4e-13 CL0123