Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1795 ATGTTAAAACGGAGACTGCATCATACCAAGCTTAAATTAATAAAGGCCCAGAATATTAGGATGGAACTGCTTAATGTACTGGAGGCTGTTTGCAAAGAGAAGGAAGAAACAAGAGACATGCTGCAGAAGCTTCCGAATATGCTCTTTCCCTCCACTCCATTCCAATTGCCCCACGTATTTCCTCAATTCCACCAACAAAACATTATTTTGCTGCCTACTAACCCAAACTCAAGCATCACAGAATCCTATAGTCTCTCACATATTTCTTCTCCGGTAGATCCCTTTGTGGAAGCAGCCTCTTGGCCAGAGTTTTCAAATATCAACTTCTACATAAGCTGTCAAACAATGTACCGAAATCCTTTGCAAACATGGTGTAAGCCTACATTTCAGTTTCACCAATCTGATCAGAGCATGTCTTTTAATTCCATGAAGCCTGTTGAGCTTTTGGAATGGGATACGCGAGAGGGAAGGTCCGTCCCTGGATTTAACAATGCAAGTTCTTCCAGAAACCACGTTCAGAGGCGACTTCTAGATGAGTCCATTCTTGATGATCGTTCTCTGCATTTTCAAAGCCATGGTTTGGATATCTCTGTCATACAGTCTCTTCCATTATCTAAGTTTAAGAAAAGTGAGGGAGAAGAGAAGCCGAATAACGCAGATTGTGCAATTTGCTTAGGAGAGTTTGAAGAAGGGGAGTGGCTAAATCATCTTCCTAACTACACCTATGTCTTCCATGCTTCCTGTATTGCCTCATGGTTTCAGTCTCACTCAAATTGTCCCCTCTGCAGATCTCATGTCCATCATGACCTCACTACTAACCTAGAGTGCTCCATATCTTCCTACACATTGCTAGAGACTTTGAGGAGGGAAGACTTTTCTCAAGAAAGCGTTGCCTGTTTACAATCCATTCGCTCTGACAACCTACATAGCTTAGCTTTTAGATAA 945 0.4201 MLKRRLHHTKLKLIKAQNIRMELLNVLEAVCKEKEETRDMLQKLPNMLFPSTPFQLPHVFPQFHQQNIILLPTNPNSSITESYSLSHISSPVDPFVEAASWPEFSNINFYISCQTMYRNPLQTWCKPTFQFHQSDQSMSFNSMKPVELLEWDTREGRSVPGFNNASSSRNHVQRRLLDESILDDRSLHFQSHGLDISVIQSLPLSKFKKSEGEEKPNNADCAICLGEFEEGEWLNHLPNYTYVFHASCIASWFQSHSNCPLCRSHVHHDLTTNLECSISSYTLLETLRREDFSQESVACLQSIRSDNLHSLAFR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1795 314 SUPERFAMILY RING/U-box 213 269 - -
Glsi14g1795 314 PANTHER RING-H2 FINGER PROTEIN ATL16 175 275 IPR044600 GO:0016567|GO:0016740
Glsi14g1795 314 Coils Coil 24 44 - -
Glsi14g1795 314 Pfam Ring finger domain 220 263 IPR001841 -
Glsi14g1795 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 270 IPR013083 -
Glsi14g1795 314 ProSiteProfiles Zinc finger RING-type profile. 221 263 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1795 Glsi-ChrGlsi14 18254448 18256578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1795 173 275 C3H Transcription Factor Family AT1G04360 41.667 6.18e-19 84.7