Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1794 ATGGCAGCCATCCTCCTTCTTAATTTATCATGTGAACATGTTTTGGTCTGTTCTCCATTTCTTGTTGGTGGTGCCCTGGTCATGGCAGTTATACTTCCATTTATGGAGTTCCAGCTGGTTTATGCTTCCTTGTTATCTTTTTTTTCAGGGTTTCAGGAAGATTTAACAGGTGGAGTCTCCTTTCAGCAACCCATGGCTCCGGCTAAAGTTGATAATTCAAAGAAGACTGACCCAAAGGCACAGGCCTTGAAAACTGCTAAAGCAGTCAAGTCAGGCCCTACCTTCAAGAAGAAGGCCAAGAAAATTCGAACTTCTGTCACATTCCATCGACCAAAGACATTGAAAAAGGATAGGAACCCCAAATACCCTTGTATTAGTGCTCCACCAAGGAATAAGCTTGATCATTATCAAATTCTGAAATATCCTCTCACCACTGAGTCAGCAATGAAGAAGATTGAAGACAATAACACTTTGGTTTTCATTGTTGACTTACGTGCTGACAAGAAGATAAAGGATGCAGTGAAGAAAATGTATGACATTCAAGCCAAGAAAGTAAATACTTTGATCAGGCCCGATTGTACCAAGAAGGCCTATGTCAGGTTGACTCCTGATTATCATACCTTGGATGTCGCGAACAAGATTGGGATTATCTAA 654 0.4098 MAAILLLNLSCEHVLVCSPFLVGGALVMAVILPFMEFQLVYASLLSFFSGFQEDLTGGVSFQQPMAPAKVDNSKKTDPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPCISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKIKDAVKKMYDIQAKKVNTLIRPDCTKKAYVRLTPDYHTLDVANKIGII 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1794 217 Pfam Ribosomal protein L23, N-terminal domain 79 128 IPR005633 -
Glsi14g1794 217 Gene3D - 99 217 IPR012677 -
Glsi14g1794 217 FunFam 60S ribosomal protein L23a 97 217 - -
Glsi14g1794 217 ProSitePatterns Ribosomal protein L23 signature. 195 210 IPR001014 GO:0019843
Glsi14g1794 217 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 135 209 IPR012678 GO:0003735|GO:0005840|GO:0006412
Glsi14g1794 217 PANTHER 60S RIBOSOMAL PROTEIN L23A 71 217 IPR013025 GO:0003735|GO:0005840|GO:0006412
Glsi14g1794 217 Hamap 50S ribosomal protein L23 [rplW]. 138 217 IPR013025 GO:0003735|GO:0005840|GO:0006412
Glsi14g1794 217 Pfam Ribosomal protein L23 138 197 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1794 Glsi-ChrGlsi14 18245005 18249632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1794 65 217 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 85.714 2.93e-64 194