Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1790 ATGGAACTTCAAGGGTTTCTCATCACTCTCTTCCTCCTATCCCTGATTTTCCTCTTTCTTTACAGGCCACACCGCCACCGCCACCGTCTCCCTCCGGCTCCTTGGCCGCAGCTCCCAATCATCGGACATTTGCATCTCTTAGGTCCCCTGGTCCACCAGTCCCTCCACCGCCTCTCCCTCCGATATGGGCCCTTATTCTCTCTTCACTTTGGCTCTGTCCCCTGCGTCGTGGCTTCCACTCCTTACTTTGCCAAGCAACTACTTCAAGCCAACGAGCTCTCCTTCAGCTGTCGGATTGAAGGCGCCGCCGTGAAACGCCTCACTTACGAGTCCTCTCTGGCATTTGCGCCCTACGGAGATTACTGGAGGTTCATCAAGAAGCTGAGCATGAGCGAGCTCTTGGGTGGTCGTGGCATCAACAACTTCATGTGCTTGCGAGCCCAAGAGTATCATAGGCTTCTAAGGCTTCTGGCTCAGAAAGCTCGTGCTTGTGAGGCCGTTAATGTCACGGAGGAGTTGCTCAAGTTGACGAATAATGTGATTTCTAGGATGATGTTGGGGGAAGCCGAGGAAGCTAGGGAGGTAGTGCGTGAGGTGACAAAGATCTTCGGGGAGTTTAATATTTCTGATTTCGTTTGGTTGTTCAAGAAAGTGGACTTGCAAGGGTTTGGGAAGAGAATAGAGGATATATTTCAGAGGTTTGATTCCTTGGTAGAAAGGGTTATTACTAAACGCGAACAAGGCAGGAAAAATAGGCAAAAAATGGAATATGGAGAGGGTGAGATCAAGGATTTCCTTGATGTTTTGCTTGATTGTATGGAGGATGAAGGCTCCGAGATCAAAGTTAAGAGGGTTCACATTAAGGCCCTTATCATGGATTTCTTCACAGCGGGGACAGATACCACAGCCATTGCAGTAGAATGGGCATTAGTGGAGCTCATCAAGCACCCCAAGTTACTGCAAATTGCTCGGCAAGAGATCCATGACGTGGTCGGAAATCATAGGCTGGTTGAAGAATCGGACGGTCCAAATCTTCCCTTCATTCAAGCTATTGTAAAAGAAACGTTTCGTCTCCACCCTCCGGTACCCTTGGTTACCAGGAGATGCGTGGCAGAGTGTACCATCGACAACTACGTGATCCCGGAGAACGCACTGCTATTTGTCAACGTTTGGGCCATAGGAAGGGATCCGAACTACTGGGAAAGCCCCTTGGAATTCCGGCCAGAAAGATTCTTAAAGCCGCTAGAAGAGAGTTTATCCACGCGCCTTGTGGATGTGAGAGGACAGCATTTTCAGCTTCTGCCATTTGGGTCTGGTAGGAGGATGTGCCCTGGCGTAACTTTAGCCATGCAGGAGGTGCCGGCTTTACTGGCCGGCATCATTCAGTGCTTTGATTTTCAAGTGGTGGGCCCCCAGGGGAAGATTGTGATGGGTGATGATGATTTTGTGATTGATGAGGACGAGAGACCCGGTTTGACGGCTCCGCGAGCTCATGATCTGGTGTGTGTTCCCGTTGCAAGGCCCAACTGTGGCCAACTTATATAA 1545 0.501 MELQGFLITLFLLSLIFLFLYRPHRHRHRLPPAPWPQLPIIGHLHLLGPLVHQSLHRLSLRYGPLFSLHFGSVPCVVASTPYFAKQLLQANELSFSCRIEGAAVKRLTYESSLAFAPYGDYWRFIKKLSMSELLGGRGINNFMCLRAQEYHRLLRLLAQKARACEAVNVTEELLKLTNNVISRMMLGEAEEAREVVREVTKIFGEFNISDFVWLFKKVDLQGFGKRIEDIFQRFDSLVERVITKREQGRKNRQKMEYGEGEIKDFLDVLLDCMEDEGSEIKVKRVHIKALIMDFFTAGTDTTAIAVEWALVELIKHPKLLQIARQEIHDVVGNHRLVEESDGPNLPFIQAIVKETFRLHPPVPLVTRRCVAECTIDNYVIPENALLFVNVWAIGRDPNYWESPLEFRPERFLKPLEESLSTRLVDVRGQHFQLLPFGSGRRMCPGVTLAMQEVPALLAGIIQCFDFQVVGPQGKIVMGDDDFVIDEDERPGLTAPRAHDLVCVPVARPNCGQLI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1790 514 SUPERFAMILY Cytochrome P450 21 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Glsi14g1790 514 FunFam Cytochrome P450 family protein 22 502 - -
Glsi14g1790 514 Pfam Cytochrome P450 32 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PANTHER STEROID 21-HYDROXYLASE-RELATED 11 497 - -
Glsi14g1790 514 CDD CYP93 63 504 - -
Glsi14g1790 514 Gene3D Cytochrome P450 21 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi14g1790 514 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1790 Glsi-ChrGlsi14 18178261 18180720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1790 1 507 Cytochrome P450 AT5G06900 44.231 7.45e-147 429