Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1776 ATGTATCCACACTCCATCACCAAATTCTCACGCGCCGCCGACTTCCTCGGCTATCTGCCGTCGCCAGATGCCTCTCTTCCCTCTGCTCCACCAATGCTCCCCACTGCTTGTCACCAAAACCTCGTGCCCGACCAACTGGACACGCAACTCAACTCAGAGGTAAGCCACAACAGCTGCAGTAGTGGGTGTGGGTCGCCAAGTTCTCTGGCGAGTTACGGAGGTCAAGGGTCTAGTATGATGCAGAGGAGCATTAGCAGCCATTCGCTGCAAAAGAATGGGGTCCACCACCCCGTTTCTCCTCAATTTGCCGAGTTGTTTTTGGACTCGGAGATGGGTTCGGTGTGGAGAGTTTGCAGTACTGATGATTTGCAGAGCAATGACAGCATTAATGTAATGCAACATAATAGTAATCGCCGGTCAGAAAGTCCATTGTCAAGCGAAAGCAGTATGATTATAGAAGGAATGAGTAGAGCCTATCCTTATAGCCCGGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGAGAAACCAGAGGAACTTCACCAAGAAAATTAAGCAGTATGCGTGTAGGAAGACTTTGGCAGACAGCAGGCCACGCGTCAGAGGACGATTTGCTCGAAATGAAGAAATTGAAAAGAACCCTCCGGCTCAGTGGAGTCACATTGGTGGTGGTGGAGAAGAAGATGAGGAAGATGAAAATTGGGTCAATTTCTTTGAAGCCTTAGTTGCTGCAAATCTTGTTCAGGAGCCTCAAGGCAATTCCTCCTTTTCTCTGATGTATTAA 789 0.4842 MYPHSITKFSRAADFLGYLPSPDASLPSAPPMLPTACHQNLVPDQLDTQLNSEVSHNSCSSGCGSPSSLASYGGQGSSMMQRSISSHSLQKNGVHHPVSPQFAELFLDSEMGSVWRVCSTDDLQSNDSINVMQHNSNRRSESPLSSESSMIIEGMSRAYPYSPEEKKVRIERYRSKRNQRNFTKKIKQYACRKTLADSRPRVRGRFARNEEIEKNPPAQWSHIGGGGEEDEEDENWVNFFEALVAANLVQEPQGNSSFSLMY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1776 262 MobiDBLite consensus disorder prediction 210 231 - -
Glsi14g1776 262 ProSiteProfiles CCT domain profile. 166 209 IPR010402 GO:0005515
Glsi14g1776 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 37 219 IPR045281 GO:0009909
Glsi14g1776 262 Pfam CCT motif 168 209 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1776 Glsi-ChrGlsi14 18083942 18085466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1776 154 211 C2C2-CO-like Transcription Factor Family AT5G24930 46.552 1.31e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi14g1776 CCT 7.8e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1776 14 18083942 18085466 Glsi14g1776 14 18083942 18085466 ECH