Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi14g1772 | ATGGGAAGCCAAATCTTTTCGACTATGATTACAGCACCTCTTCAGGGAAAGATGGAACAGCCAGATAAATCACCAAAGCAATCATCTCTAATCCCGCCATTTCCTAGAGACCCTCGTGGTTCGCTGGAAGTCTTCAACCCTTCCTCCTACTCAACCGAGAACCCAACAAACACGACGTTCCGTTCGCAGCCCAAGTGGACAAGTTGGATAGAGCCATCCAGCAGCCACGAGCTATCCTCCTCCAACTCTGGTCTTGCCGATGAGATTACCAACACTTCATGGATGGCCCTCAGGGACTCCAATCCACCCACACAATCGTCGTCACCGATCGGCCAGCAGACACTTTCCTCTATTCTCAACGACGGCGGTGAGTCAGTCCAGAAATCGCCCGCCACCGTGCATGTTTCAGGAGAAATCGGAGCGGCGGCGCAGAGAGCTGCCGAGTGGGGTTTGGTGCTGAAAACTGACACGGACACCGGAAAGCCGCAAGGAGTGGCTGTTAGAAAGTCGGGCGGGGAGGAATCGAGTGCCAAACTCACGGGTACTTCGAGAAGGAACTCGAACAACTCGGTCAGAAGCTCCGGCGATTCGTCGGACGACGGGGGCAAGGAATTACGAGGAATTCCAAGAGTTTCCGAGGACTTGAAGGACGCTTTGTCGGTGTTCCAACAAACTTTCGTGGTCTCGGATGCTACCAAACCCGATTACCCGATCATGTATGCGAGTGCCGGATTCTTTAAGATGACGGGTTATACTTCGAAGGAGGTCGTTGGGAGGAATTGTCGTTTTTTACAGGGAGCGGATACGGATCCAGCAGACGTGGCAAAGATAAGGGAAGCGTTGCAAGCTGGGACGAGTTACTGTGGAAGATTACTGAATTACAAGAAAGATGGGACACCATTTTGGAACCTTCTTACTATTTCACCCATCAAGGACGACGATGGGAAAGTCCTCAAATTTATTGGAATGCTAGTGGAGGTTAGCAAGCATACTGAGGGGTCCAAGGAGAAGATGTTACGTCCCAATGGATTGCCCGAGTCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCTGCCACTTCAGTATCTGAGTTGGTGGAGGCCGTGAAGCGGCCCCGGGCACTCAGTGAATCAGCAAACCGTCCGTTGATCAGAAAATCGGGAGGTGGTGAAGATGAACAGAGAGCAGAAAATTTGTCAAGGAGAAAATCGGAGAGCGTGGCTACATTTAGGCCAAAACCACATGGGGAAAATACAAATTCAATGCACCGAATTAGTGAGCTGCCTGAAAAGAAACAGAAAAATTCTCGTCGCCGTTCTTTCTTGGGGTTCATCAGGAAAAGTCAGTCCAATGATGAAAGCTTTGACAATGAAGTTGTTGAAGACAGCTCTGGGAGTGAGGATGATGAGAGACCTGATAGTATTGATGACAAAGTAACGCAAAAGGAAAAGCGAAAGGGTCTTGATCTTGCAACCACTCTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGACTGCCTGACAATCCCATTATCTTTGCATCTGATAGCTTCCTAGAGCTTACAGAGTACAGTCGTGAAGAAATTTTGGGCAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAACAGAAGTTACCGTGCAGCTAATTAATTATACAAAGAGTGGCAAGAAGTTCTGGAACCTGTTCCATCTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTGGAACCTCTTCACAACAGTATTGCAGAAGATACTGCTAAGGAGGGTGAACATTTGGTCAAACAAACTGCAGAAAATGTGGATGAGGCAGTGAGAGATCTTCCGGATGCAAATTTGAAACCAGAAGATTTATGGATGAATCATTCAAAAGTGGTTCAACCAAAACCTCATAGGAAGGATAGCCCTGCTTGGATTGCTATCCAAAAGATCCTAGATAGTGGAGAACAGGTAGGCTTAAAGCATTTTAGGCCAATAAAACCTTTGGGGTCTGGAGATACTGGCAGTGTGCATTTGGTGGAGCTATGTGGAACTGGTCATTATTTTGCTATGAAGGCTATGGATAAAGGTGTTATGCTCAATCGCAACAAGGTGCATAGAGCTTGCACGGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTACCCGCATTGTATGCTTCCTTTCAGACCAAAACACATGTTTGTCTGATTACTGATTATTGTCCTGGTGGAGAATTGTTCCTGCTTCTGGACCGACAGCCAACAAAAGTTCTCAAGGAAGATGCAGCAAGATTTTATGCTGTTGAGGTAGTGGTTGCATTGGAGTACCTCCATTGTCAAGGTATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTCCAAAGCAATGGGCATGTGTCTCTGACAGATTTTGATTTGTCGTGTTTAACATCTTGCCAACCGCAGCTTCTAATTCCACCTACAAATGAGAAGAAGAAACAAAAGAAAGGTCAACAGACTCCAATATTTATGGCTGAACCTATGAGAGCATCAAATTCTTTTGTTGGCACAGAGGAGTACATAGCTCCGGAAATTATAACAGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGATTTATGGATATACACCATTCAGGGGAAAGACAAGGCAAAAAACATTTGCAAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGCAAAGCAGTTGATGTACCAGTTATTGCAAAGAGATCACAAAAATAGATTGGGGTCGCAGGAAGGAGCAAATGAAATTAAGCGTCACCCATTCTTCCGAGGTGTCAATTGGGCCCTTGTTCGTTGCATGAACCCTCCTAAGCTTGATGCTCCTCTCTTCGGGGATGAAAAGGAAGCCAAAAATGTTGATCCTTCGCTACTGGATCTAGAGACAAATATTTTCTGA | 3054 | 0.4545 | MGSQIFSTMITAPLQGKMEQPDKSPKQSSLIPPFPRDPRGSLEVFNPSSYSTENPTNTTFRSQPKWTSWIEPSSSHELSSSNSGLADEITNTSWMALRDSNPPTQSSSPIGQQTLSSILNDGGESVQKSPATVHVSGEIGAAAQRAAEWGLVLKTDTDTGKPQGVAVRKSGGEESSAKLTGTSRRNSNNSVRSSGDSSDDGGKELRGIPRVSEDLKDALSVFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGADTDPADVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMLVEVSKHTEGSKEKMLRPNGLPESLIRYDARQKEKAATSVSELVEAVKRPRALSESANRPLIRKSGGGEDEQRAENLSRRKSESVATFRPKPHGENTNSMHRISELPEKKQKNSRRRSFLGFIRKSQSNDESFDNEVVEDSSGSEDDERPDSIDDKVTQKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNSIAEDTAKEGEHLVKQTAENVDEAVRDLPDANLKPEDLWMNHSKVVQPKPHRKDSPAWIAIQKILDSGEQVGLKHFRPIKPLGSGDTGSVHLVELCGTGHYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAARFYAVEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSCQPQLLIPPTNEKKKQKKGQQTPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMIYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLMYQLLQRDHKNRLGSQEGANEIKRHPFFRGVNWALVRCMNPPKLDAPLFGDEKEAKNVDPSLLDLETNIF | 1017 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi14g1772 | 1017 | NCBIfam | PAS domain S-box protein | 512 | 602 | IPR000014 | - | |
| Glsi14g1772 | 1017 | NCBIfam | PAS domain S-box protein | 238 | 332 | IPR000014 | - | |
| Glsi14g1772 | 1017 | MobiDBLite | consensus disorder prediction | 472 | 486 | - | - | |
| Glsi14g1772 | 1017 | Gene3D | Phosphorylase Kinase; domain 1 | 687 | 771 | - | - | |
| Glsi14g1772 | 1017 | ProSiteProfiles | PAS repeat profile. | 487 | 560 | IPR000014 | - | |
| Glsi14g1772 | 1017 | SMART | serkin_6 | 688 | 975 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi14g1772 | 1017 | MobiDBLite | consensus disorder prediction | 175 | 196 | - | - | |
| Glsi14g1772 | 1017 | ProSiteProfiles | PAC domain profile. | 561 | 615 | IPR000700 | - | |
| Glsi14g1772 | 1017 | CDD | STKc_phototropin_like | 686 | 999 | - | - | |
| Glsi14g1772 | 1017 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 232 | 324 | IPR035965 | - |
Showing 1 to 10 of 42 entries
Duplication type information
Functional genes information
Transcription factors information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Glsi14g1772 | 14 | 18037614 | 18050409 | Glsi14g1772 | 14 | 18037614 | 18050409 | ECH |
Showing 1 to 1 of 1 entries