Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1772 ATGGGAAGCCAAATCTTTTCGACTATGATTACAGCACCTCTTCAGGGAAAGATGGAACAGCCAGATAAATCACCAAAGCAATCATCTCTAATCCCGCCATTTCCTAGAGACCCTCGTGGTTCGCTGGAAGTCTTCAACCCTTCCTCCTACTCAACCGAGAACCCAACAAACACGACGTTCCGTTCGCAGCCCAAGTGGACAAGTTGGATAGAGCCATCCAGCAGCCACGAGCTATCCTCCTCCAACTCTGGTCTTGCCGATGAGATTACCAACACTTCATGGATGGCCCTCAGGGACTCCAATCCACCCACACAATCGTCGTCACCGATCGGCCAGCAGACACTTTCCTCTATTCTCAACGACGGCGGTGAGTCAGTCCAGAAATCGCCCGCCACCGTGCATGTTTCAGGAGAAATCGGAGCGGCGGCGCAGAGAGCTGCCGAGTGGGGTTTGGTGCTGAAAACTGACACGGACACCGGAAAGCCGCAAGGAGTGGCTGTTAGAAAGTCGGGCGGGGAGGAATCGAGTGCCAAACTCACGGGTACTTCGAGAAGGAACTCGAACAACTCGGTCAGAAGCTCCGGCGATTCGTCGGACGACGGGGGCAAGGAATTACGAGGAATTCCAAGAGTTTCCGAGGACTTGAAGGACGCTTTGTCGGTGTTCCAACAAACTTTCGTGGTCTCGGATGCTACCAAACCCGATTACCCGATCATGTATGCGAGTGCCGGATTCTTTAAGATGACGGGTTATACTTCGAAGGAGGTCGTTGGGAGGAATTGTCGTTTTTTACAGGGAGCGGATACGGATCCAGCAGACGTGGCAAAGATAAGGGAAGCGTTGCAAGCTGGGACGAGTTACTGTGGAAGATTACTGAATTACAAGAAAGATGGGACACCATTTTGGAACCTTCTTACTATTTCACCCATCAAGGACGACGATGGGAAAGTCCTCAAATTTATTGGAATGCTAGTGGAGGTTAGCAAGCATACTGAGGGGTCCAAGGAGAAGATGTTACGTCCCAATGGATTGCCCGAGTCCTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCTGCCACTTCAGTATCTGAGTTGGTGGAGGCCGTGAAGCGGCCCCGGGCACTCAGTGAATCAGCAAACCGTCCGTTGATCAGAAAATCGGGAGGTGGTGAAGATGAACAGAGAGCAGAAAATTTGTCAAGGAGAAAATCGGAGAGCGTGGCTACATTTAGGCCAAAACCACATGGGGAAAATACAAATTCAATGCACCGAATTAGTGAGCTGCCTGAAAAGAAACAGAAAAATTCTCGTCGCCGTTCTTTCTTGGGGTTCATCAGGAAAAGTCAGTCCAATGATGAAAGCTTTGACAATGAAGTTGTTGAAGACAGCTCTGGGAGTGAGGATGATGAGAGACCTGATAGTATTGATGACAAAGTAACGCAAAAGGAAAAGCGAAAGGGTCTTGATCTTGCAACCACTCTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCAAGACTGCCTGACAATCCCATTATCTTTGCATCTGATAGCTTCCTAGAGCTTACAGAGTACAGTCGTGAAGAAATTTTGGGCAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAACAGAAGTTACCGTGCAGCTAATTAATTATACAAAGAGTGGCAAGAAGTTCTGGAACCTGTTCCATCTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAACTTGATGGTAGTCAACATGTGGAACCTCTTCACAACAGTATTGCAGAAGATACTGCTAAGGAGGGTGAACATTTGGTCAAACAAACTGCAGAAAATGTGGATGAGGCAGTGAGAGATCTTCCGGATGCAAATTTGAAACCAGAAGATTTATGGATGAATCATTCAAAAGTGGTTCAACCAAAACCTCATAGGAAGGATAGCCCTGCTTGGATTGCTATCCAAAAGATCCTAGATAGTGGAGAACAGGTAGGCTTAAAGCATTTTAGGCCAATAAAACCTTTGGGGTCTGGAGATACTGGCAGTGTGCATTTGGTGGAGCTATGTGGAACTGGTCATTATTTTGCTATGAAGGCTATGGATAAAGGTGTTATGCTCAATCGCAACAAGGTGCATAGAGCTTGCACGGAGAGAGAAATCCTCGACATGTTGGACCATCCTTTTCTACCCGCATTGTATGCTTCCTTTCAGACCAAAACACATGTTTGTCTGATTACTGATTATTGTCCTGGTGGAGAATTGTTCCTGCTTCTGGACCGACAGCCAACAAAAGTTCTCAAGGAAGATGCAGCAAGATTTTATGCTGTTGAGGTAGTGGTTGCATTGGAGTACCTCCATTGTCAAGGTATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTCCAAAGCAATGGGCATGTGTCTCTGACAGATTTTGATTTGTCGTGTTTAACATCTTGCCAACCGCAGCTTCTAATTCCACCTACAAATGAGAAGAAGAAACAAAAGAAAGGTCAACAGACTCCAATATTTATGGCTGAACCTATGAGAGCATCAAATTCTTTTGTTGGCACAGAGGAGTACATAGCTCCGGAAATTATAACAGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGATTTATGGATATACACCATTCAGGGGAAAGACAAGGCAAAAAACATTTGCAAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGCAAAGCAGTTGATGTACCAGTTATTGCAAAGAGATCACAAAAATAGATTGGGGTCGCAGGAAGGAGCAAATGAAATTAAGCGTCACCCATTCTTCCGAGGTGTCAATTGGGCCCTTGTTCGTTGCATGAACCCTCCTAAGCTTGATGCTCCTCTCTTCGGGGATGAAAAGGAAGCCAAAAATGTTGATCCTTCGCTACTGGATCTAGAGACAAATATTTTCTGA 3054 0.4545 MGSQIFSTMITAPLQGKMEQPDKSPKQSSLIPPFPRDPRGSLEVFNPSSYSTENPTNTTFRSQPKWTSWIEPSSSHELSSSNSGLADEITNTSWMALRDSNPPTQSSSPIGQQTLSSILNDGGESVQKSPATVHVSGEIGAAAQRAAEWGLVLKTDTDTGKPQGVAVRKSGGEESSAKLTGTSRRNSNNSVRSSGDSSDDGGKELRGIPRVSEDLKDALSVFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGADTDPADVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMLVEVSKHTEGSKEKMLRPNGLPESLIRYDARQKEKAATSVSELVEAVKRPRALSESANRPLIRKSGGGEDEQRAENLSRRKSESVATFRPKPHGENTNSMHRISELPEKKQKNSRRRSFLGFIRKSQSNDESFDNEVVEDSSGSEDDERPDSIDDKVTQKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNSIAEDTAKEGEHLVKQTAENVDEAVRDLPDANLKPEDLWMNHSKVVQPKPHRKDSPAWIAIQKILDSGEQVGLKHFRPIKPLGSGDTGSVHLVELCGTGHYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAARFYAVEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSCQPQLLIPPTNEKKKQKKGQQTPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMIYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLMYQLLQRDHKNRLGSQEGANEIKRHPFFRGVNWALVRCMNPPKLDAPLFGDEKEAKNVDPSLLDLETNIF 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1772 1017 NCBIfam PAS domain S-box protein 512 602 IPR000014 -
Glsi14g1772 1017 NCBIfam PAS domain S-box protein 238 332 IPR000014 -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 472 486 - -
Glsi14g1772 1017 Gene3D Phosphorylase Kinase; domain 1 687 771 - -
Glsi14g1772 1017 ProSiteProfiles PAS repeat profile. 487 560 IPR000014 -
Glsi14g1772 1017 SMART serkin_6 688 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 175 196 - -
Glsi14g1772 1017 ProSiteProfiles PAC domain profile. 561 615 IPR000700 -
Glsi14g1772 1017 CDD STKc_phototropin_like 686 999 - -
Glsi14g1772 1017 SUPERFAMILY PYP-like sensor domain (PAS domain) 232 324 IPR035965 -
Glsi14g1772 1017 CDD PAS 502 602 IPR000014 -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 154 207 - -
Glsi14g1772 1017 Gene3D Transferase(Phosphotransferase) domain 1 772 988 - -
Glsi14g1772 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Glsi14g1772 1017 PANTHER FLIPPASE KINASE 1-RELATED 189 993 - -
Glsi14g1772 1017 ProSiteProfiles Protein kinase domain profile. 688 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1772 1017 FunFam LOV domain-containing protein 687 771 - -
Glsi14g1772 1017 Pfam Protein kinase domain 690 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1772 1017 SMART pac_2 564 606 IPR001610 -
Glsi14g1772 1017 SMART pac_2 288 330 IPR001610 -
Glsi14g1772 1017 FunFam Putative LOV domain-containing protein 772 987 - -
Glsi14g1772 1017 ProSiteProfiles PAC domain profile. 285 339 IPR000700 -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 418 438 - -
Glsi14g1772 1017 Gene3D PAS domain 475 640 - -
Glsi14g1772 1017 Gene3D PAS domain 225 382 - -
Glsi14g1772 1017 FunFam Putative LOV domain-containing protein 225 381 - -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 1 132 - -
Glsi14g1772 1017 FunFam LOV domain-containing protein 476 640 - -
Glsi14g1772 1017 CDD PAS 238 327 IPR000014 -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 456 471 - -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 387 411 - -
Glsi14g1772 1017 SUPERFAMILY PYP-like sensor domain (PAS domain) 503 602 IPR035965 -
Glsi14g1772 1017 ProSiteProfiles PAS repeat profile. 211 282 IPR000014 -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 373 439 - -
Glsi14g1772 1017 SMART pas_2 213 282 IPR000014 -
Glsi14g1772 1017 SMART pas_2 489 558 IPR000014 -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 44 132 - -
Glsi14g1772 1017 MobiDBLite consensus disorder prediction 453 486 - -
Glsi14g1772 1017 SUPERFAMILY Protein kinase-like (PK-like) 668 997 IPR011009 -
Glsi14g1772 1017 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Glsi14g1772 1017 Pfam PAS domain 232 328 IPR000014 -
Glsi14g1772 1017 Pfam PAS domain 510 602 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1772 Glsi-ChrGlsi14 18037614 18050409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1772 19 1017 AGC Kinase Gene Family AT3G45780 70.508 0.0 1389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi14g1772 Pkinase 9.2e-63 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1772 14 18037614 18050409 Glsi14g1772 14 18037614 18050409 ECH