Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1766 ATGCACTTGCAGAGCAACGGCGTCGCATGGGATTTTAAAGCAGAACCTTTATACGCGCGCTATTCAAATGGCGTTGCCGTTTTGGTTCTTATCAGAGAAGCTCTCAAGTTGGATGTTCCAATGAGCAATACTGTTGTTGGACAAAGAGGTCTAATAGATCAAAATCATAAGTTTTCTGACGCAAACAGACTCAATAATGGAGTAGTTAATGGAGGACAAGGCTCTGGATCATCCACTGAAGATGATGTTAGAAGTAATAAAGTTACTGAAGATGGAAACAGTGGGGTGAGGGGTCTAATTCAAATCCATGAGAGTTTGCAGATGTCACAAAAACAACCTCAAGGGTCGGCGATACGATGGGAGCGGTTTCTCCCTTTGAGATCAATAACAGTTCTGCTTGTGGAAGATGATGATTCCACACGTCATGTTGTGAGTGCACTGTTACGAAATTGTTGTTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCATGGAAAATATTAGAAGATCCAGGCAATCGTATTGATCTTATCCTAACAGAGGTAGCTATGCCTGTTTTATCTGGAATATGTCTTTTGGGCAAGATCATGAGCCACAAAACTCTCAAGAATATCCCAGTAATTATGATGTCATCTCATGATTCTATGGGCATAGTCTTTAAGTGTTTGTCAAAGGGTGCAGTTGATTTTTTAGTGAAACCAACTCGGAGGAACGAACTTAAAAACCTTTGGCAGCATGTATGGAGAAGATGCCACAGTTCAAGTGGTAGTGGGAGTGAAAGTGGGACACAGACCAGAAAATCTGCGAAGTCCAGAAGTAATGATGTATGTGGAAACAATAGTGACAGTAGTGGTGAGAATGACTTTGGAAGTAAAGGCTTGAGTATTCGAGATGGAAGTGACAATGGAAGTGGAACTCAGAGTTCATGGACTAAATGTCCAGCTGAAGTTGCCAGCCCTCACCCAGTTTCAGCTCATAAACAGTTGGTTGATGCCCCTGATAGCACATGTGCCCAACTGATGCATACAAAGCCCAGAAATGTTAGTAGTACATGTGTGCATGTGACCGAAAAAGAGTGCCACAAACAGAGTGAACTGCTTGATGATGTTGCCATGGGCAAAGACTTGGGGATGGCAATATCTTTAAATATGCAACTAGAACATCGACCTGAGGAGTTGTCTACCAATCCAATGTGTAAAAGGATGAATAAGCTGTCTGACATAGATGGTAAGCAACTCAATGAAGGACACAGTAATGTCTCTGGAAAAGGACAAGTGGTATACGACAGTTATAAAACCAGGACACAGAAATACCAGGTTATGAATGTCATTGATGCAGTTACTAGTAGCAGCAGTCCCCAGGCTGAAAGCAGAGACTTGAACATTACCAATGGCTTTTCTGGCATCTCACAAACTAAAGCAAGCTGTTGCTCTAAGCAGCATCCATCTCTTGAACTAACTTTGAAGAGGCTAGGAGGAGTACAAGATGCTAAAATTGTGGCAGGTGATGAGCGCAATGTTTTAAAACGTTCAGATCTGTCAGCATTCTCAAAATATAACACTGCTTCTTCTGCTTATCAGGCTCAAACAGGAAATGTAGGAAGCTGTTCTCCATTAGATAATAGCTCAGTTGCACCATATACGGAGACAACACACAACTTTCCGTCTCATTCAAACGTGACTCCTCCAAATCAGCAGTCTAATGGGAGCAACAACATCCGCGACATGGCCTCAACTAATATATATCTTACTACCAAAGGAGAAGCTTTTGACAAGAAGCCAGAGTCTATAACAGGAGTTGGATCTTTTAATTCTTCTGCTCTCCAAACTATGCTAAACTGTAGTATTTCTTCAACTCAGAAGAAAATTTCTACCCAGTCAGAAAATGAAGGGAAAATTAAAGCTCAAGTGGGAGGCTCTGAACAAAGTTTCCAAGTCGAGCACAATCATTGTCAGCTTCACCATTATAATCGTATTGCCCACAACACTACACTACAACTCCATTCGTCAAATGTGTTTGAAGGACCAGTTGAAAGTAATGCTGCAAACTTTGGTGTGGATGGAATTGAAGCTGAGAGTGATCATGGGAGCAATGGACTAAATGGTAGCTGCACCAGCTTGACAACCAGAATGATAACTGCTGAAAGTGGTAATAAGGCAGCTGGGAGCATTGGAGTCGGTGGCATTGACAGGAAAAACAGTGGGGATGGGTCAGATGAGGGACGAATTGCATTAAGAGAGGCTGCCTTGACCAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGAGAAGAGGGTTCGATACTACAGCAGGAAAAAACTAGCAGAACAGCGGCCTCGTATTAGGGGACAATTTGTTAGACGAATAGTGTTCGACACCAAAGAAGAAGATGCACAGCAATGA 2403 0.4211 MHLQSNGVAWDFKAEPLYARYSNGVAVLVLIREALKLDVPMSNTVVGQRGLIDQNHKFSDANRLNNGVVNGGQGSGSSTEDDVRSNKVTEDGNSGVRGLIQIHESLQMSQKQPQGSAIRWERFLPLRSITVLLVEDDDSTRHVVSALLRNCCYEVTAVSNGLQAWKILEDPGNRIDLILTEVAMPVLSGICLLGKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPTRRNELKNLWQHVWRRCHSSSGSGSESGTQTRKSAKSRSNDVCGNNSDSSGENDFGSKGLSIRDGSDNGSGTQSSWTKCPAEVASPHPVSAHKQLVDAPDSTCAQLMHTKPRNVSSTCVHVTEKECHKQSELLDDVAMGKDLGMAISLNMQLEHRPEELSTNPMCKRMNKLSDIDGKQLNEGHSNVSGKGQVVYDSYKTRTQKYQVMNVIDAVTSSSSPQAESRDLNITNGFSGISQTKASCCSKQHPSLELTLKRLGGVQDAKIVAGDERNVLKRSDLSAFSKYNTASSAYQAQTGNVGSCSPLDNSSVAPYTETTHNFPSHSNVTPPNQQSNGSNNIRDMASTNIYLTTKGEAFDKKPESITGVGSFNSSALQTMLNCSISSTQKKISTQSENEGKIKAQVGGSEQSFQVEHNHCQLHHYNRIAHNTTLQLHSSNVFEGPVESNAANFGVDGIEAESDHGSNGLNGSCTSLTTRMITAESGNKAAGSIGVGGIDRKNSGDGSDEGRIALREAALTKFRQKRKERCFEKRVRYYSRKKLAEQRPRIRGQFVRRIVFDTKEEDAQQ 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1766 800 Pfam Response regulator receiver domain 131 242 IPR001789 GO:0000160
Glsi14g1766 800 MobiDBLite consensus disorder prediction 63 93 - -
Glsi14g1766 800 SMART REC_2 129 244 IPR001789 GO:0000160
Glsi14g1766 800 Pfam CCT motif 746 787 IPR010402 GO:0005515
Glsi14g1766 800 MobiDBLite consensus disorder prediction 297 314 - -
Glsi14g1766 800 ProSiteProfiles CCT domain profile. 746 788 IPR010402 GO:0005515
Glsi14g1766 800 Gene3D - 129 282 - -
Glsi14g1766 800 MobiDBLite consensus disorder prediction 252 327 - -
Glsi14g1766 800 MobiDBLite consensus disorder prediction 252 290 - -
Glsi14g1766 800 SUPERFAMILY CheY-like 128 253 IPR011006 -
Glsi14g1766 800 FunFam Two-component response regulator-like PRR37 129 287 - -
Glsi14g1766 800 MobiDBLite consensus disorder prediction 63 82 - -
Glsi14g1766 800 ProSiteProfiles Response regulatory domain profile. 130 248 IPR001789 GO:0000160
Glsi14g1766 800 PANTHER TWO-COMPONENT RESPONSE REGULATOR 130 350 IPR045279 GO:0009736
Glsi14g1766 800 CDD psREC_PRR 131 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1766 Glsi-ChrGlsi14 18014104 18020749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1766 73 536 Response Regulator Gene Family AT5G60100 44.937 3.72e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Glsi14g1766 Response_reg 5.3e-21 CL0304