Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi14g1761 | ATGTTCGATCTTAATCTGAATGCGGGTTCGGCTCATGACGATGACTCCATCATCTTCTTCGACAAGCTTTCTGAAGGTTCCGGGAATCAAATGGCAGAGTCGGGGATCTCCAATTCCTCTATCGTCAATGCTGACGGGTCCAGCAATGGAGGAGGAGATGACGACTCCTGCTCTACACGGGGCGGGGAATTCTTCACCTTTAATTTCGATATCCTTAAGGACGAAGGCGGGAAAGATGTCACAGCCAAGGAGCTATATCTGGTGAGTGGAGCAAAAGGAGTGGACGGTGAGTCCGAAAATTGGCTGGGTCAGTCTTCTTCAACCCTTCCATCAAGGAAGAGCTGGATGGGTCTCTCGTTCGATCATCAAGGTGGGAAAGGAGAGATGAACATGATTCAGGTTCAGCAACAACCTCAACAGCAAGTGAAGAAGAGCAGAAGGGGTCCAAGGTCTCGGAGCTCGCAGTATAGAGGGGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGATACCGCTCATGCCGCTGCTAGAGCCTACGACCGAGCTGCTATTAAGTTTAGGGGAGTTGGTGCGGACATCAATTTCAATGTCAGTGATTACGAGGATGATCTTAAGCAGATGAAAAATCTCACCAAGGAGGAATTCGTGCACATACTGCGTCGCCAAAGTACTGGTTTCTCAAGGGGCAGTTCGAAATACCGAGGAGTAACACTGCACAAATGTGGTCGATGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTACGATAAGGCAGCTATCAAATGCAACGGAAGGGAGGCAGTGACAAACTTTGAGCCAAGAACATATGAAGGGGAGATAAAATCCAAGGCCATTAATGAAGGTGGCAGTCAAAATCTTGATCTCAATTTGGGAATTGCAAGCCCGGGTAGTGATCCTGAAGACAAGAGGGGTCATCTTCAGTTCCAGTCTTTCCCTTACAACATCCATGCCAGAAGAAATTCTAGGGAGACCAAAACTGATTCAATAATTGGTGATCCATCTATGAAAAGGCTGGTTGGAAATGAAGAGCGTCCTTTGAAATGGAACGGCGTATATCCTAGTTTCTTTCTCAATGAGGAAAGGGCAGACAGAATCATCTTAGATCCTTCACAAGGACTCCCCCACTGGCCGTGGCCAACGCATAGTCAGGTTAATGCTACCCCAGTACCACCGTTCTCTACTGCAGCATCATCACGATTCTCAATTTCGGCTACCTGTCCATCGACTACCATCTTTCCAACAAAACCTATGAACTCTATTCCCAACAGTATCTGTTTTACTTCATCCAGCGCAGCTGGCGGTAATGCATCTCAACTTTGTTACCAGATGGAGCCCTCCCAGGCACCGCCCTAG | 1470 | 0.4776 | MFDLNLNAGSAHDDDSIIFFDKLSEGSGNQMAESGISNSSIVNADGSSNGGGDDDSCSTRGGEFFTFNFDILKDEGGKDVTAKELYLVSGAKGVDGESENWLGQSSSTLPSRKSWMGLSFDHQGGKGEMNMIQVQQQPQQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVGADINFNVSDYEDDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPRTYEGEIKSKAINEGGSQNLDLNLGIASPGSDPEDKRGHLQFQSFPYNIHARRNSRETKTDSIIGDPSMKRLVGNEERPLKWNGVYPSFFLNEERADRIILDPSQGLPHWPWPTHSQVNATPVPPFSTAASSRFSISATCPSTTIFPTKPMNSIPNSICFTSSSAAGGNASQLCYQMEPSQAPP | 489 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi14g1761 | 489 | SMART | rav1_2 | 155 | 217 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | SMART | rav1_2 | 247 | 310 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | CDD | AP2 | 155 | 213 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | MobiDBLite | consensus disorder prediction | 136 | 156 | - | - | |
Glsi14g1761 | 489 | SUPERFAMILY | DNA-binding domain | 154 | 213 | IPR016177 | GO:0003677 | |
Glsi14g1761 | 489 | MobiDBLite | consensus disorder prediction | 30 | 56 | - | - | |
Glsi14g1761 | 489 | Pfam | AP2 domain | 155 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | Pfam | AP2 domain | 246 | 296 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | Gene3D | AP2/ERF domain | 246 | 305 | IPR036955 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | Gene3D | AP2/ERF domain | 154 | 213 | IPR036955 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | PRINTS | Ethylene responsive element binding protein signature | 248 | 259 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | PRINTS | Ethylene responsive element binding protein signature | 286 | 306 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | ProSiteProfiles | AP2/ERF domain profile. | 247 | 304 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | FunFam | AP2-like ethylene-responsive transcription factor | 154 | 213 | - | - | |
Glsi14g1761 | 489 | SUPERFAMILY | DNA-binding domain | 246 | 305 | IPR016177 | GO:0003677 | |
Glsi14g1761 | 489 | ProSiteProfiles | AP2/ERF domain profile. | 155 | 211 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 128 | 342 | - | - | |
Glsi14g1761 | 489 | FunFam | AP2-like ethylene-responsive transcription factor | 246 | 306 | - | - | |
Glsi14g1761 | 489 | CDD | AP2 | 246 | 304 | IPR001471 | GO:0003700|GO:0006355 | |
Glsi14g1761 | 489 | MobiDBLite | consensus disorder prediction | 30 | 55 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi14g1761 | Glsi-ChrGlsi14 | 17991258 | 17994924 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi14g1761 | 112 | 330 | AP2-EREBP Transcription Factor Family | AT4G36920 | 73.362 | 2.28e-97 | 298 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-AP2 | Glsi14g1761 | AP2 | 2.9e-09 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi14g1761 | 14 | 17991258 | 17994924 | Glsi04g0284 | 04 | 1844612 | 1848623 | CCT | |
Glsi14g1761 | 14 | 17991258 | 17994924 | Glsi14g1761 | 14 | 17991258 | 17994924 | ECH |