Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1755 ATGGCTGACGTTAATCCAAACACCGCCACCGATTTTCCGGCTTCTCCAACGCACGGAGGAAAGTTCATTCAGTACAACATTTTCGGCAACCTCTTCGAAGTTACCGCCAAGTACCGTCCTCCGATCATGCCTATTGGTCGCGGCGCCTACGGAATCGTCTGCTCGCTGTTGAATACGGGAACTAACGAAATGGTGGCTATTAAGAAGATAACGAACGCTTTCGACAATCACATGGACGCTAAGCGTACGCTCCGTGAGATTAAACTTCTTCGGCATTTGGATCATGAAAATGTAATTGCTTTAAGAGATGTGATTCCCCCTCCCTGTCGTAGAGAGTTTACTGATGTCTACATAGCCATGGAACTCATGGATACTGATCTTCACCACATCATTCGCTCCAATCAAAATCTTTCAGAGGACCACTGCCAGTACTTCTTGTATCAGCTTCTTCGTGGACTAAAGTATATACATTCTGCAAATATTATCCATAGAGATTTGAAACCAAGCAACCTGTTGCTGAATGCAAGCTGCGATTTGAAGATATGTGATTTTGGGCTCGCACGGCCAAATTTAGAAAATGATTTCATGACAGAATATGTCGTCACAAGATGGTATAGGGCTCCTGAATTATTGTTGAACTCCTCGGATTACACATCTGCAATAGATGTGTGGTCTGTGGGCTGCATCTTTATGGAGCTTATGAATAAAAGGCCTCTGTTTCCAGGCAGAGATCATGTGCATCAGATGCGGTTATTGACAGAGCTTCTCGGCACTCCAACTGACGCCGACCTTGGGTTAATGAAAAATGAGGATGCGAGACGATATATCCGACAACTTCCCCAATATCCTCGTCAACCACTAGCTACGGCTTTCCCCCATGTTCATCCCTTTGCCATTGATCTCATCGATAGAATGTTGACAATTGACCCTACTAGAAGAATCACGGTTGAAGAGGCATTAGCACATCCATACCTGGCAAAACTACATGATGTCGCTGATGAGCCAGTCTGCTCAGAGCCATTCTCATTTGATTTTGAGCAACAACCCTTGGAAGAAGAGCAAATAAAAGATATGATCTACAAGGAGGCATTGGCACTCAATCCAGAGTATGCATGA 1116 0.4453 MADVNPNTATDFPASPTHGGKFIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSLLNTGTNEMVAIKKITNAFDNHMDAKRTLREIKLLRHLDHENVIALRDVIPPPCRREFTDVYIAMELMDTDLHHIIRSNQNLSEDHCQYFLYQLLRGLKYIHSANIIHRDLKPSNLLLNASCDLKICDFGLARPNLENDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKRPLFPGRDHVHQMRLLTELLGTPTDADLGLMKNEDARRYIRQLPQYPRQPLATAFPHVHPFAIDLIDRMLTIDPTRRITVEEALAHPYLAKLHDVADEPVCSEPFSFDFEQQPLEEEQIKDMIYKEALALNPEYA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1755 371 Pfam Protein kinase domain 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1755 371 SUPERFAMILY Protein kinase-like (PK-like) 44 333 IPR011009 -
Glsi14g1755 371 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
Glsi14g1755 371 FunFam Mitogen-activated protein kinase 123 352 - -
Glsi14g1755 371 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1755 371 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi14g1755 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 327 - -
Glsi14g1755 371 FunFam Mitogen-activated protein kinase 24 133 - -
Glsi14g1755 371 CDD STKc_TEY_MAPK 32 368 - -
Glsi14g1755 371 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Glsi14g1755 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Glsi14g1755 371 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1755 371 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1755 Glsi-ChrGlsi14 17909374 17912610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1755 10 371 MAP Kinase Gene Family AT3G45640 82.320 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi14g1755 Pkinase 3.8e-72 CL0016