Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1751 ATGTTGCCAAGGAAAACTGAAACCAGAGTCTCCCAATTAACGAACCAAAACACTCAGGAGACGGTTTCAGATCTGAAGCCAAGATCCATTTTCTCTATGTCTACCTCGAAAATGGAACAGTTCATAGACAACTTGCCGCCAATGGATCTGATGCGCTCCGAGAAGATGACTTTCGTTCAACTCATCATTCCCGTCGAGTCCGCTCACCGGGCCATCTCTTATTTGGGCGAACTCGGCCTCCTCCAATTCCGAGATTTAAATGATGATAAAAGCCCTTTCCAGAGAACCTTTGTTAATCAGGTAAAGCGATGTGGAGAAATGTCAAGAAAGCTTCGATTCTTCAAAGATCAAATCAGTAAAGCTGGTCTAATGTCTTCTCCTCATCCTGTCTTGCAACCAGATATTGAGTTGGAGGAACTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATTAACTCTAATAGTGAGAAACTTCTGCAATCATATAACGAGCTTCTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGATTTTCTAGTGTCAAGTCATAACCATGCTGTTTCAGAGGAGAGAGAACTGGAGGAGAATGTATACCCAAATGATGGCTATGTTGATACAGCATCTTTGCTTGAGCAGGAACTGAGACCTGGACCGTCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGCTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGATGAACAAATTGTGGATCCTGTTTCGAATGAGATGATTGAGAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAGCAGGCAAGAACAAAGATTCTGAAAATCTGTGAGGCATTTGGTGCAAATTGTTACCCTGTCCCTGAAGATATAATTAAACAGAGGCAAATAACGAGGGAGGTTTCTTCACGCCTTTCTGACTTAGAGGCAACTTTGGATGCTGGGACTAGGCATCGGAATAATGCCCTTGCTTCTGTAGAGGGTCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCCATATTTGCAAAAACACAGATTCAGGAGGCACTGCAGCGTGCAACTTTTGATTGCAATTCTCAAGTTGGCATAATCTTCCATTCAATGGATGCGGTGGAATCACCACCTACTTATTTTAGGACAAACCATTTTACAAGTGCATATCAGGAAATTGTTGATGCCTATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAGTTATTACATTCCCATTTCTTTTTGCGGTGATGTTTGGGGATTGGGGTCATGGAATTTGCTTGTTGCTGGGAGCATTGGTTCTAATAGCACGTGAAAGCAGGCTCAGCACGCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTTTGATGTCACTGTTTTCAATCTATTGTGGATTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTGGGTCTGCTTACAAATGCCGAGATGCTTCATGCAGGGATGCACATACTGCTGGCTTAGTCAAGTACCAAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGGGGAAGTCGCTCAGAACTGCCTTTCCTGAACTCTCTCAAGATGAAGATGTCCATTCTGTTGGGTGTGGCACAGATGAATTTAGGAATTATATTAAGTTACTTCAATGCGCGTTACTTTGGCAGTTCACTGGATATAAGGTACCAGTTTGTGCCACAGATAATTTTCCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTTGTCAAGTGGTGTACTGGCTCTCAGGCGGACCTCTATCATGTAATGATTTATATGTTTCTAAGCCCCACTGATAATCTTGGTGAGAATCAGTTGTTTTGGGGACAAAGGCCACTTCAAATTGTGTTATTGCTTTTGGCTCTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCACATGGAGAGATTCCAAGGACGCACTTATGGTATGCTTACTACCTCTGAGATGGATCTTGAGGTGGAACCAGATTCTGCTAGGCAACATCATGAGGAATTCAACTTCAGTGAGGTATTTGTTCACCAAATGATCCACTCCATTGAGTTTGTTCTAGGTGCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTGTCCACTGTTTTTTATGAGAAAGTCCTGCTTCTCGCTTGGGGGTATGATAATCTTGTTATCCGGTTAGTGGGGCTAGCCGTTTTTGCTTTTGCAACTGCCTTTATACTTCTCATGATGGAGACCCTTAGTGCTTTTCTTCATGCCCTGCGTCTTCACTGGGTAGAATTTCAAAACAAATTCTACCATGGCGATGGCTACAAGTTCAGACCTTTTTCTTTTGCCTCCTTAGCAGAGGATGATGATTGA 2571 0.4208 MLPRKTETRVSQLTNQNTQETVSDLKPRSIFSMSTSKMEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNDDKSPFQRTFVNQVKRCGEMSRKLRFFKDQISKAGLMSSPHPVLQPDIELEELEIQLAEHEHELIEINSNSEKLLQSYNELLEFKIVLQKACDFLVSSHNHAVSEERELEENVYPNDGYVDTASLLEQELRPGPSNQSGLRFISGIICKSKLLRFERMLFRATRGNMLFNQAPADEQIVDPVSNEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDIIKQRQITREVSSRLSDLEATLDAGTRHRNNALASVEGHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDCNSQVGIIFHSMDAVESPPTYFRTNHFTSAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESRLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGGSAYKCRDASCRDAHTAGLVKYQDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNARYFGSSLDIRYQFVPQIIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHMERFQGRTYGMLTTSEMDLEVEPDSARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLAEDDD 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1751 856 Coils Coil 135 164 - -
Glsi14g1751 856 PIRSF ATP6V0A1 46 856 IPR026028 GO:0000220|GO:0046961
Glsi14g1751 856 MobiDBLite consensus disorder prediction 1 21 - -
Glsi14g1751 856 Pfam V-type ATPase 116kDa subunit family 74 848 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi14g1751 856 MobiDBLite consensus disorder prediction 7 21 - -
Glsi14g1751 856 PANTHER VACUOLAR PROTON ATPASES 50 854 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1751 Glsi-ChrGlsi14 17876449 17890312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1751 38 849 Primary Pumps ATPases(2) AT2G28520 82.454 0.0 1396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1751 14 17876449 17890312 Glsi04g0290 04 1878592 1889043 CCT
Glsi14g1751 14 17876449 17890312 Glsi14g1751 14 17876449 17890312 ECH