Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1742 ATGGAGTGCAGTGAGACAAACACTCCCACTTCCTCTTCCCCTCTTTCTCATCAGTCTCCTACTTCCTCATCTTCCCCTCCACATGTTGTTGTTAGCCCTTGCGCTGCGTGCAAGATTTTGAGGCGTAGATGTGCCGAGAAATGTGTGTTGGCACCCTACTTCCCTCCCACTGAGCCTGCCAAGTTTACCATTGCCCACCGCGTCTTCGGTGCCAGCAACATAATCAAGTTCTTGCAGGAACTTCCAGAGAGCCAAAGAGCTGATGCCGTGAGCAGCATGGTCTACGAGGCAAGTGCAAGAATAAGAGACCCGATTTATGGTTGCGCGGGTGCAATCTGCCAGCTCCAAAAGCAAGTGAATGAGCTTCAAGCACAGTTAGCCAAGGCACAAGCAGAGGTTGTTAACATGCAATTACAGCAAGCCAATCTCCTGGCTCTCTTTTGCATGGAAATGTCACAAACTCCTCAGGAATCACCACAGCAATCAGTGGACCATTTCATTTCAAGTCCTCCCCACTCCGACGGCTATCAGGCCAATCTCAACTTCTTCGACGAAAGCACTAGCCTCAACTCACTGTGGGAGCCTCTTTGGACATGA 597 0.5042 MECSETNTPTSSSPLSHQSPTSSSSPPHVVVSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPIYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQLQQANLLALFCMEMSQTPQESPQQSVDHFISSPPHSDGYQANLNFFDESTSLNSLWEPLWT 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1742 198 MobiDBLite consensus disorder prediction 1 29 - -
Glsi14g1742 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 31 160 - -
Glsi14g1742 198 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Glsi14g1742 198 Pfam Lateral organ boundaries (LOB) domain 33 130 IPR004883 -
Glsi14g1742 198 Coils Coil 112 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1742 Glsi-ChrGlsi14 17720594 17721562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1742 29 198 AS2 family AT2G28500 65.405 4.59e-78 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi14g1742 LOB 2.4e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1742 14 17720594 17721562 Glsi04g0301 04 1939221 1940463 CCT
Glsi14g1742 14 17720594 17721562 Glsi14g1742 14 17720594 17721562 ECH