Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1738 ATGATGCCAAAGTGCCCTCATGAAGGATGCAATCCTGAGCTTCTAGTTGACAGCTGCAGGAAATTCTTGACAGATAAATTAATTGAGACCATGCAACAACGAATAAAGGAAGCTTCAATTCCAATTACTGATAAAATTTATTGCCCTTATCAAAGATGCTCTGCACTAATCTCAAAAAACGAGGTTATAGAGTACTCCAATAGTATTCTTGGCGACCCTGAACAGTCAGGACCCAAGAAATGCATAAAAAACGGTCTTTTCTGTATCATCTGCGAGGTCCCTTGGCATAGTGGTATGATATGCTCTGTTTACAAAAGGTTAAATCCTAACCTTCCTGCTGAAGATGTGAAGCTGAAGTCTCTGGCAACAACGAGTTTGTGGCGGCAGTGTGTGAAGTGCCACCATATAATTGAACTTGCTCTTGCTGAAGGCTGCTATCACATGACTTGCATGTACTTTATTAACCTTTACTTAGATTTTAAGCTGTATAATAAGAATGATTGGATGGGTGATGGGGAGATGAGGCATTCTTGTAAGAATCTTGTTTTGAGATTGTTCTGTTATGTGCATTACGAACCTGTGGGAATCATACTAAATGGGAAATATGGTAGATGTGGTTATGAATTTTGCTACAATTGTGGAGTTGAATGGAAGAAAAAAGCATCAATATGTTCTTGTCCACTCTGGGACGAGGATAATATTTAG 705 0.3901 MMPKCPHEGCNPELLVDSCRKFLTDKLIETMQQRIKEASIPITDKIYCPYQRCSALISKNEVIEYSNSILGDPEQSGPKKCIKNGLFCIICEVPWHSGMICSVYKRLNPNLPAEDVKLKSLATTSLWRQCVKCHHIIELALAEGCYHMTCMYFINLYLDFKLYNKNDWMGDGEMRHSCKNLVLRLFCYVHYEPVGIILNGKYGRCGYEFCYNCGVEWKKKASICSCPLWDEDNI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1738 234 SMART ibrneu5 29 101 IPR002867 GO:0008270
Glsi14g1738 234 SUPERFAMILY RING/U-box 116 151 - -
Glsi14g1738 234 Gene3D - 99 234 - -
Glsi14g1738 234 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 4 188 IPR031127 GO:0004842|GO:0016567
Glsi14g1738 234 Pfam IBR domain, a half RING-finger domain 43 101 IPR002867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1738 Glsi-ChrGlsi14 17679308 17680371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1738 5 152 C3H Transcription Factor Family AT2G19610 35.333 5.56e-23 94.4