Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1725 ATGGCGCTGAAACCTATGCTATGGGAGGCACCGAGCTCTCAAGAGCATCTTTACGTGAAGCTATACTCTATGCACTAGTATTTCTCAATGGAGGGAGATCAACTGGGCTCTAAGTTTCCACCTGGTTTCAGGTTCCATCCTTCTGATGAGGAGCTCATAGTTCACTACTTGCAAAATAAAATCAGCTCACGTCCACTTCCAGCATCCATTATTGCTGAAATAGATTTGTATAAGTATAACCCATGGGAGCTACCCAAGAAAGCATTGTTTGGGGAGGATGAATGGTATTTCTTCAGCCCAAGAGATCGGAAGTACCCAAATGGATTACGGCCAAACAGAGCAGCAGCTTCAGGATATTGGAAGGCAACTGGAACTGACAAGCCAATCATTAGGTCTTGTGGATCAAAGCGCATTGGAGTGAAGAAAGCTCTGGTTTTTTATAGAGGTCGGCCTCCGAACGGGTCTAAGACGGACTGGAACATGAAGGAATACAGATTGATTGACACAGCCACCAAACCCTCTGGCTTCAAAGGCTCCATGCGCTTAGATGAGTGGGTACTGTGTCGGGTTCGACACAGAGGCTACTCATTAAAGAATACATGTGAAAATCAAGACAATCCTCGGGGACCAAATTTGCTGCCAAATCTACCGTGGTCTGAGGAATCCCCATCAAACATGGTCACAGATTTTCAATAA 696 0.454 MALKPMLWEAPSSQEHLYVKLYSMHXYFSMEGDQLGSKFPPGFRFHPSDEELIVHYLQNKISSRPLPASIIAEIDLYKYNPWELPKKALFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPIIRSCGSKRIGVKKALVFYRGRPPNGSKTDWNMKEYRLIDTATKPSGFKGSMRLDEWVLCRVRHRGYSLKNTCENQDNPRGPNLLPNLPWSEESPSNMVTDFQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1725 231 ProSiteProfiles NAC domain profile. 39 193 IPR003441 GO:0003677|GO:0006355
Glsi14g1725 231 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 38 203 - -
Glsi14g1725 231 Gene3D NAC domain 48 196 IPR036093 GO:0003677|GO:0006355
Glsi14g1725 231 Pfam No apical meristem (NAM) protein 40 166 IPR003441 GO:0003677|GO:0006355
Glsi14g1725 231 FunFam NAC domain-containing protein 72-like 48 198 - -
Glsi14g1725 231 MobiDBLite consensus disorder prediction 201 231 - -
Glsi14g1725 231 SUPERFAMILY NAC domain 37 193 IPR036093 GO:0003677|GO:0006355
Glsi14g1725 231 MobiDBLite consensus disorder prediction 217 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1725 Glsi-ChrGlsi14 17542984 17544178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1725 39 202 NAC Transcription Factor Family AT1G61110 68.023 1.34e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi14g1725 NAM 4.8e-38 No_clan