Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1715 ATGCTCGATAAGAGTTTTTCTTTTGCCAAAGCGATGGGCTGTTGTAGTTGCTTTGGTTTCATCAGAAGACCCAAACCTCAGAGAGATAAAATTGGCTTCAATAAAAATCTCTCTCAGGAGCTATTGTTAGATGAAGACGTCGAAGATGATGATGGCTCATATAATGGAGAGGTTACTAACACCACTAGTGGAGATGATAGTGAGGTGCAAACTCGCGCCATACGATCTGAGGACGTTTTGAAGTTGAGAGCAGAGAATGGCATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGCACAGAGGATGAAAAAGGAAACAAGATGATAAACCAGTATCTTCGTGAATATAAGATCGGTTCTGGTAGCTATGGGAAAGTGGTTCTATATCGAAGTTCTGTAGATGGAAAGCATTATGCAATTAAGGCCTTTCATAAGTCTCATTTGCTGAAGCTTCGAGTTGCGCCCTCAGAGACTGCCATGACTGATGTTCTGCGTGAGGTACTCATCATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAAGTGATTGATGACCCAGAATCAGATCACTTTTACATGGTACTTGAATATGTGGAAGGCAAATGGGCTTGTGAGGGTTCAGGAATTCTTTGTGGCTTAGGTGAAGAGACCACTAGGAAATACTTGCGTGATATAGTGTCGGGTTTAACCTATCTCCATGCTCATCATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTTACTCGTCATGGTACAGTAAAGATAGGGGACTTCAGCGTCAGCCAGGCTTTCGAGGACGATAATGATGAGCTTCGTCGATCACCTGGAACTCCTGTTTTCACTGCACCTGAATGTTGTTTGGGTCTAACCTATCATGGGAAAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATACTGGGGGAATACCCATTTCTTGGAGATACACTTCAAGATACTTATGACAAAATAGTCAATAATCCTTTAGTACTCCCAGATGATATGAACCCGCAGTTGAAGAACTTGATAGAAGGACTACTTTGCAAAGATCCAAGACTAAGGATGACATTGGATGATGTTGCGGAGCATAGCTGGGTTATAGGAGACGATGGGCCAATTCCCAAGTATTTGTGTTGGTGCAAACGCAAGAGATCGGAGAGAGAAGACTTTGATAGGAGCAATATTACTGACTAA 1227 0.4205 MLDKSFSFAKAMGCCSCFGFIRRPKPQRDKIGFNKNLSQELLLDEDVEDDDGSYNGEVTNTTSGDDSEVQTRAIRSEDVLKLRAENGMICRQFPVKETHKVVRTEDEKGNKMINQYLREYKIGSGSYGKVVLYRSSVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWACEGSGILCGLGEETTRKYLRDIVSGLTYLHAHHIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDMNPQLKNLIEGLLCKDPRLRMTLDDVAEHSWVIGDDGPIPKYLCWCKRKRSEREDFDRSNITD 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1715 408 Gene3D Transferase(Phosphotransferase) domain 1 218 384 - -
Glsi14g1715 408 MobiDBLite consensus disorder prediction 48 68 - -
Glsi14g1715 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Glsi14g1715 408 FunFam Serine/threonine-protein kinase Ssp1 110 212 - -
Glsi14g1715 408 Gene3D Phosphorylase Kinase; domain 1 110 211 - -
Glsi14g1715 408 SMART serkin_6 116 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1715 408 FunFam Serine/threonine-protein kinase GRIK2 106 406 - -
Glsi14g1715 408 MobiDBLite consensus disorder prediction 54 68 - -
Glsi14g1715 408 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Glsi14g1715 408 SUPERFAMILY Protein kinase-like (PK-like) 112 387 IPR011009 -
Glsi14g1715 408 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 73 379 - -
Glsi14g1715 408 CDD STKc_LKB1_CaMKK 122 377 - -
Glsi14g1715 408 Pfam Protein kinase domain 118 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi14g1715 408 ProSiteProfiles Protein kinase domain profile. 116 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1715 Glsi-ChrGlsi14 17483149 17489466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1715 108 384 CBL-interacting serine-threonine protein kinases AT5G35410 32.852 1.61e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Glsi14g1715 Pkinase 6e-57 CL0016