Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1709 ATGCTAAGTCGACGACACGTCGTTATCGTTACGCTCACTGCCCTTCTCCTCATCTCGTCGTTCTCTTTCTCGTCATGCAAGAACCTCGAAAATGACGACGACGAAGATCTCAGCTTTCTCGAAGAAGCTGATGACAGCTCCACTACACACCACCACTACCCAGATCCGGGACAGTTCGATGATGATGCCGTCGACGAAGATGATTTCGAGGACTTCTCCGGCTACGACGAGTCGGAGGCCAATCGGGAAGCTTACAAACAGCCAGAGGTGGACGATAAGGACGTCGTCGTTTTGAAGGAGAGGAATTTCAGCGACGTTGTGGAGAATAACCAGTTTGTGATGGTGGAATTCTATGCTCCCTGGTGTGGTCACTGCCAGGCTTTGGCGCCAGAGTATGCTGCAGCCGCGACCGAGTTGAAGTCTGAGAATGTGGTTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTAGCCCATGAATACGATGTTCAGGGATTCCCCACTGTCTACTTTTTTGTCGATGGGGTTCACAAGCCTTATACTGGTCAGAGGACCAAAGATGCCATAGTGACCTGGATTAGGAAGAAGACAGGACCTGGTATATACAACATAACTGCATTGGATGACGCTGAACGCATATTGACCTCTGAAAGCAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTGGGTCCTGAGAGTGAGGAGCTAGCAGCTGCTTCAAGACTTGAGGATGCTGTCAATTTTTATCAGACCGTGAATCCAGATGTGGCAAAGCTTTTCCATGTTGATCCAAATGTTAAACGCCCTGCTTTAGTCCTGCTCAAGAAAGAGGAGGAAAAATTGAACCATTTTGATGGCGAATTTGTAAAATCTAATATATCAGATTTTGTACTCTTCAACAAGCTTCCTTTGGTTACGACTTTTACAAGAGAAAATGCCCCATCAATTTTTGAAAGTTCAATCAAGAAACAGCTGTTACTATTTGTGACTTCAAATGATTCAGAGAAGGTCATCCCAGTATTTCAAGAAGCAGCAAAATTTTTTAAGGGAAAGCTGATCTTTGTACGTGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTTCAGATTATTTTGGTATCACTGGGAATGCTCCCAGAGTACTTGCATACACAGGAAATGATGATGGAAAGAAATTTGTACTTGATGGAGAGTTAACCATTGACAAAATTAAGGCATTTGGGCAAGATTTCCTTGAAGACAAGCTAAAACCTTTTTATAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAGTAGTTGTTGGGGATAGTTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTTGAGATTTATGCACCCTGGTGTGGCCATTGCCAAGCACTAGAACCAATATACAACAAGCTTGCAAAACATCTGCGTGGCATTGAGTCCCTTGTAATAGCCAAGATGGATGGAACAACAAATGAGCATCCCAGGGCGAAGGCTGATGGATTCCCTACTCTTCTGTTCTTCCCAGCAGGAAACAAGAGTTCTGACCCTGTTACTGTCGATACAGATCGTACGGTGGTGGCCATGTATAAGTTCATAAAGAAACATGCATCAATCCCATTCAAGCTCGAGAAACCAACCGCAACTCCAAAACCTGAGAGTTCGGACGCCACGGAGAGTCAGAGTAGCAGTAGCGACGTGAAAGACGAATTATGA 1722 0.4443 MLSRRHVVIVTLTALLLISSFSFSSCKNLENDDDEDLSFLEEADDSSTTHHHYPDPGQFDDDAVDEDDFEDFSGYDESEANREAYKQPEVDDKDVVVLKERNFSDVVENNQFVMVEFYAPWCGHCQALAPEYAAAATELKSENVVLAKVDATEENELAHEYDVQGFPTVYFFVDGVHKPYTGQRTKDAIVTWIRKKTGPGIYNITALDDAERILTSESKVVLGFLNSLVGPESEELAAASRLEDAVNFYQTVNPDVAKLFHVDPNVKRPALVLLKKEEEKLNHFDGEFVKSNISDFVLFNKLPLVTTFTRENAPSIFESSIKKQLLLFVTSNDSEKVIPVFQEAAKFFKGKLIFVRVEMDNEDVGKPVSDYFGITGNAPRVLAYTGNDDGKKFVLDGELTIDKIKAFGQDFLEDKLKPFYKSDPVPESNDGDVKVVVGDSFDEIVLDESKDVLLEIYAPWCGHCQALEPIYNKLAKHLRGIESLVIAKMDGTTNEHPRAKADGFPTLLFFPAGNKSSDPVTVDTDRTVVAMYKFIKKHASIPFKLEKPTATPKPESSDATESQSSSSDVKDEL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1709 573 FunFam Protein disulfide-isomerase 302 427 - -
Glsi14g1709 573 ProSiteProfiles Thioredoxin domain profile. 76 198 IPR013766 -
Glsi14g1709 573 CDD PDI_a_PDI_a'_C 433 535 - -
Glsi14g1709 573 FunFam Protein disulfide-isomerase 428 541 - -
Glsi14g1709 573 CDD PDI_b_family 201 298 - -
Glsi14g1709 573 Gene3D Glutaredoxin 299 427 - -
Glsi14g1709 573 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Glsi14g1709 573 FunFam Protein disulfide-isomerase 84 196 - -
Glsi14g1709 573 MobiDBLite consensus disorder prediction 545 573 - -
Glsi14g1709 573 SUPERFAMILY Thioredoxin-like 205 312 IPR036249 -
Glsi14g1709 573 CDD PDI_b'_family 312 412 - -
Glsi14g1709 573 PRINTS Thioredoxin family signature 113 121 - -
Glsi14g1709 573 PRINTS Thioredoxin family signature 121 130 - -
Glsi14g1709 573 PRINTS Thioredoxin family signature 162 173 - -
Glsi14g1709 573 MobiDBLite consensus disorder prediction 43 86 - -
Glsi14g1709 573 Pfam Thioredoxin-like domain 236 409 - -
Glsi14g1709 573 Pfam Thioredoxin 433 523 IPR013766 -
Glsi14g1709 573 Pfam Thioredoxin 95 195 IPR013766 -
Glsi14g1709 573 Gene3D Glutaredoxin 198 298 - -
Glsi14g1709 573 ProSiteProfiles Thioredoxin domain profile. 411 540 IPR013766 -
Glsi14g1709 573 PANTHER PROTEIN DISULFIDE ISOMERASE 27 572 - -
Glsi14g1709 573 ProSitePatterns Thioredoxin family active site. 114 132 IPR017937 -
Glsi14g1709 573 NCBIfam protein disulfide-isomerase domain 99 196 IPR005788 GO:0003756
Glsi14g1709 573 FunFam protein disulfide-isomerase A2 197 301 - -
Glsi14g1709 573 Gene3D Glutaredoxin 428 541 - -
Glsi14g1709 573 SUPERFAMILY Thioredoxin-like 429 540 IPR036249 -
Glsi14g1709 573 MobiDBLite consensus disorder prediction 43 59 - -
Glsi14g1709 573 CDD PDI_a_family 96 193 - -
Glsi14g1709 573 SUPERFAMILY Thioredoxin-like 88 198 IPR036249 -
Glsi14g1709 573 NCBIfam protein disulfide-isomerase 93 573 IPR005792 GO:0003756
Glsi14g1709 573 MobiDBLite consensus disorder prediction 60 74 - -
Glsi14g1709 573 ProSitePatterns Thioredoxin family active site. 453 471 IPR017937 -
Glsi14g1709 573 SUPERFAMILY Thioredoxin-like 299 430 IPR036249 -
Glsi14g1709 573 Gene3D Glutaredoxin 83 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1709 Glsi-ChrGlsi14 17441045 17445382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1709 14 17441045 17445382 Glsi04g0346 04 2200985 2210815 CCT
Glsi14g1709 14 17441045 17445382 Glsi14g1709 14 17441045 17445382 ECH